Cucurbita pepo subsp. pepo (vegetable marrow): 111796612
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Entry
111796612 CDS
T05351
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111796612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111796612
Ubiquitin system [BR:
cpep04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
111796612
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
111796612
NCBI-ProteinID:
XP_023535084
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Position
LG06:4707618..4710552
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AA seq
533 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtaaaaactctaaccggcaaaacaatcaccctcgaggtggaaagctca
gatacaatcgacaatgtaaaggctaagattcaagataaagagggaattccacccgaccaa
caaaggcttatctttgctggtaagcaacttgaggatggccgaacgctggccgattacaac
atccaaaaggaatctacactccatttggtgcttcgacttcgcggtgggatgcaaatattt
gtgaagacccttactggcaaaaccatcacccttgaggtggaaagttctgacacaattgac
aatgtcaaggctaaaatccaagataaggagggtatcccccctgatcaacagagactaatt
tttgctggtaagcagctcgaagatggtcgaactcttgctgattacaatattcagaaggaa
tctactctgcatttggttcttcgacttcgtggtggtatgcagatttttgtgaaaactttg
acaggaaaaacgatcacattggaggtagaaagttcagataccattgacaatgtgaaagct
aagatacaagataaggagggcattccaccagaccaacagagactgatttttgctggtaag
cagctcgaagatggtcgaactcttgccgattacaacattcaaaaggagtcgacgttgcat
ttggtgcttcggttgcgcggtgggatgcagattttcgtgaagacgttaacggggaagacg
atcacattggaggtagaaagttcagataccattgataatgtgaaagctaagatccaagac
aaggagggcattccaccagaccaacagcggttgatctttgctggtaagcagctcgaagat
ggtcgaactcttgccgattacaacattcaaaaggagtcaacgttgcatttggtgctccga
ttgcgcggtggaatgcagatttttgtgaagacgttaacggggaagacgatcacattggag
gtcgaaagctcggatacgatcgacaacgtgaaggcgaagattcaagacaaggagggcatt
ccaccagaccagcagcgtttgatctttgctggtaagcaactggaagatggtaggactcta
gcagattacaatatccaaaaggaatcgacattgcacttggtgcttcggttgcgaggtgga
atgcagattttcgtgaagacgttgacaggtaagacgatcacattggaggtcgaaagctcg
gacacgatcgacaacgtgaaggcaaaaattcaagacaaggagggcattccaccagaccaa
cagaggttgatctttgctggtaagcaactggaagacggcagaactctagcagattacaac
atccaaaaggagtcgacgttgcacttagtgctacgactgcgcggtggaatgcagatcttc
gtgaagacgttaacagggaagacaatcacattggaggtcgagagctcggacacgatcgac
aacgtgaaggcaaagattcaagacaaagaggggattcctccagaccaacaaaggctcatc
ttcgccggaaaacaattggaggatggtagaacattggctgattacaatattcagaaagag
tccaccctccaccttgttctccgcctgcgcggtggctcttag
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