Cucurbita pepo subsp. pepo (vegetable marrow): 111796729
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Entry
111796729 CDS
T05351
Name
(RefSeq) chaperone protein ClpB3, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cpep03110
]
111796729
Chaperones and folding catalysts [BR:
cpep03110
]
Heat shock proteins
HSP100
111796729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
Mg_chelatase
Zeta_toxin
AAA_28
AAA_18
AAA_7
ABC_tran
AAA_24
Torsin
NBD_SMAX1
NACHT
PduV-EutP
Retrotrans_gag
Motif
Other DBs
NCBI-GeneID:
111796729
NCBI-ProteinID:
XP_023535241
LinkDB
All DBs
Position
LG06:1663717..1668888
Genome browser
AA seq
986 aa
AA seq
DB search
MATRRVSKLTSSALATAKAYRISCSPSVSSRWPASWRCSSSLVGNSFAPFSVHNFFCSRQ
VNGGAMASAKYLATIFTRNFHSTPPSNYSATASSQINPTDFTEMAWEGIVGAVDTARMNK
QQVVESEHLMKALLEQKDGLARRIFSKAGLDNSSVLQATVDFISQQPKVMGETSGPIIGT
HLGLILDNARKYKKEMGDDFLSVEHFVLAFHSDKRFGQQLFKNLQLSEKDLKDAVQAVRG
NQRVTDQNPEGKFEALDKYGTDLTEFARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVII
GEPGVGKTAIAEGLAQRIVRGDVPEPLLNRKLISLDMGSLVAGAKYRGDFEERLKAVLKE
VTASNGQIILFIDEIHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLKEYRKYIEK
DAALERRFQQVFCGQPSVEDTISILRGLRERYELHHGVKISDSALVSAAVLADRYITERF
LPDKAIDLVDEAAAKLKMEITSKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLE
QDLSSLKQKQKELTEQWDREKSFMTRIRSIKEEIDRVNLEMEAAEREFDLNRAAELKYGT
LISLNRQLEEAENNLQDFRKSGISLLREEVTDLDIAEIVSKWTGIPLANLQQSERDKLVS
LEQVLHQRIVGQDIAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGY
LFNTENALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVIRRRPYSVVLFDEIEK
AHHDVFNILLQLLDDGRITDSQGRTVSFTNCVMIMTSNIGSHYILETLSNTTDSKDAVYD
LMKKQVIGLARQTFRPEFMNRIDEYIVFQPLDATQICKIVEIQIERLRDRLKQKNINLHY
TKEALELLGTLGFDPNYGARPVKRVIQQLVENEIAMLVLRGDFQEDDSIILDVDRSSFAK
DLPPQKRLCIKKIDSDSNSEAMVAHD
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggctactagaagagtttccaagctcacctcatcggctttagcaactgctaaagcgtac
aggatttcttgttctccctcggtttcctctcgttggcctgcgtcttggcgttgttcatct
tctctcgtcggtaactcctttgctcccttttctgtgcacaattttttctgctccagacaa
gttaatggtggtgccatggcgtcggccaagtatttggctacgattttcactcgaaatttc
cactctacgcctccttctaattactctgctacagcttcctctcagataaatccgacagat
ttcactgagatggcatgggaaggcatagttggtgcagttgatactgcacggatgaataag
caacaagttgtggagagtgagcatttaatgaaagctcttcttgaacagaaggatggtttg
gcaagaagaatattttcgaaggccggactcgacaattcgtcagttttgcaggctacagtt
gattttatatctcaacaaccaaaggtaatgggcgaaactagtggtccaataataggcaca
catcttggtttgatccttgacaatgctcgaaaatataaaaaagaaatgggagacgatttt
ctatctgtggaacattttgtgttagccttccattcagataagagatttgggcagcaactg
tttaagaatttgcaactaagtgaaaaagatttgaaggatgctgttcaggctgttcgtgga
aatcagagggtgaccgatcaaaatcctgaaggaaaatttgaggctcttgacaagtatggg
actgacttaactgaatttgctagacgcggtaagctcgatcccgttataggtagagatgat
gaaatacgacgatgcattcaaattctatcaaggagaacaaaaaacaatcccgtgatcatt
ggtgagcccggtgttggaaaaactgcgatcgctgaaggattagctcaacgaattgtgcgc
ggtgatgttccagaaccattgttgaatagaaagttgatatctctggacatgggttcactg
gttgctggtgcgaaataccgtggggatttcgaggaaagattgaaggctgtgctaaaggaa
gtcactgcttcaaatgggcaaattatcttgttcatagatgagattcatacagttgttggt
gcaggagctactggtggtgcaatggatgctggcaacctcttgaaaccgatgcttggtcgc
ggcgaactacgatgcatcggtgcaactacattgaaggagtatagaaaatacattgagaaa
gatgctgcgcttgaacgtagatttcaacaagtgttttgtggccaaccatctgttgaagat
acgatctctattcttcgagggttacgtgagcgatatgagctacatcatggtgtaaagata
tctgatagtgcacttgtttcagcagcagttctagcagacagatacatcactgaacggttt
ttgcctgacaaagccattgatcttgttgatgaagctgctgcaaagttgaagatggagatt
acttctaagcctaccgagttggacgagattgatagagcggtcttgaagttggagatggag
aagctctccttaaaaaacgacacggataaagccagcaaagaaaggttaagcaaattagag
caagatctgagctcacttaaacaaaagcagaaagaattgactgaacaatgggatcgagag
aagtctttcatgactcgtatacgatcgatcaaggaagagattgatagagttaaccttgag
atggaagcagctgaaagagaatttgatttgaatcgtgctgctgagctcaagtatggaact
ctaatatcccttaaccgccaattagaagaggctgaaaacaatcttcaagactttcgaaag
tccggaatttctttgcttcgtgaggaggtcacagatcttgatattgcagagattgtaagc
aaatggactggcataccattggccaacctccaacaatccgaaagagataaactggtttca
cttgaacaagtcctccatcaaaggatagttggtcaagatattgcagtaaaatcagttgca
gatgccattcgacgttcgagagcaggactctccgaccccaaccgacccatagccagcttc
atgtttatgggtccgactggtgtcggaaaaaccgagcttgcaaaagctttggctggatat
cttttcaacactgaaaatgctcttgttaggattgatatgagtgaatacatggagaaacat
gcagtttctcgtttggtaggggcaccacctggctacgtcgggtacgaagaaggcggtcag
ttgactgaagttattcgccgaagaccctactctgtggtactttttgatgagattgaaaag
gcacatcatgacgtcttcaacattttgcttcaattgctggatgatggaagaataactgat
tctcagggccgaaccgttagtttcacgaactgcgtcatgataatgacgtcgaatattggt
tctcactacatccttgaaactcttagtaatacaacagatagtaaagatgcagtctatgac
ttgatgaaaaaacaagttataggattggcaaggcaaacttttcgacctgaatttatgaac
cgtatagatgaatatatcgtcttccagcctttggatgccacccaaatatgcaagattgtt
gagatacagatcgaacggttacgtgatagacttaaacagaagaacattaatctccattat
accaaagaagctcttgagcttttagggacgttgggatttgaccccaattatggagcaagg
ccagttaagagagtaatacaacaactagtagaaaacgagattgcaatgctagttttgaga
ggcgactttcaagaagatgactcgatcattctcgacgtcgatagatcgtcgtttgccaag
gacttgcctccccaaaagagactgtgcatcaagaagatagatagcgattctaactcggag
gctatggttgcccacgactga
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