Cucurbita pepo subsp. pepo (vegetable marrow): 111800111
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Entry
111800111 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111800111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111800111
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111800111
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
HECT type E3
111800111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
Chlam_OMP
Motif
Other DBs
NCBI-GeneID:
111800111
NCBI-ProteinID:
XP_023539459
LinkDB
All DBs
Position
LG08:complement(8430226..8438839)
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AA seq
1510 aa
AA seq
DB search
MGNRGQKRTEMVDRLPADKRACSSLEFRPSSSNSSMKMHVTVINSSPGFHDNDMDTSPSA
SASSRSEGEYDKDSAYGSCDSDDAEQKHSDLRNYQRQRSSSDHGRLKRILSSLGEESELS
AQRTLLVELCEVLSFCMENSLSSMTSDSLSIVLVNLVKLDSDPEIVLLALRAITYLCDVY
PRSSSFLVRHDGVRALCQMLGVIKYLDVAEQCLIALEKISREQPVACLEAGAVMAVLTYI
DFFSTSIQRTALRTVVNVCRKLPSECPPTLIDAVPILCNLLQYEDGQLSENVALCMIKIV
ERVSQSCELLDGLCHHGLIQQVIHLINLNSRTTLSQTTYNDLLGVLVKLSSGSTVAFKTL
YELNISNTLKDILSAYNLSHGMSSSCSVVDGQRNQVCEVLKLLNELLPTGDANAEELSEK
VYFLVSNPKKLQKFGLDVLPLLVQVVSSGANLYVCCGCLTIIYKFVCLGESGMLVELLQN
TNISSFLAGVFTRKDHHVLMLALKITEIILQKLSSIFFKSFVKEGVYFAIDALITPEKYK
QLIFPVFTGVHPSIGSCQKSSRENARCLCYAFLSGCFSSTEETGNCKLDKDSVYSLAYHI
RTHYFSEELCDTDKGVTDILQNLQTLAGSLDDLLNLSLIKETPAQDEENCYALLAEIMSK
LKCGEPISTFEFIESGIVKSFINYLTNGQYMRKKGEPQIISRQFSIMERRFEVFARLLLS
SAEPPSESLPVLVLIRKLQTSLSSLENFPVVSSQGLKHRNYFATVPNGRCIPHPCVKVRF
VRGDGETDLCNYTGDIHTVDPFSSLNAIEGFLWSKVGTKKAEQSFEADSLREHQIKLLSN
VCSGWGVNPKLVGSDSMSTDLSETQGSTEVDTDEKLQYSVSCSKKGMKPKLLLYLEGKQL
EPTLTLYQAILQQHMKESETVSGTKLWNQVYTLTYKSAGESEDNSSNELFSASDKAATLK
FSSFFHGLDCILPSDLAKESPAYDVLFLLRSIEGMNRMAFHIMSHERIRAFAEGRINTLD
NIKLSVPSVPQNEFVNSKLTEKLEQQMRDFSAFSIGGMPLWCKELMDSCPFLFSFDARCK
YFRIVAFSMSHRQPYIRSYSDLRTSNDERSNSGGLPRKKVLVHRNKILDSAVKMMDQYAH
QKVLLEVEYDEEVGTGLGPTLEFYTLVGREFQKYDLGMWRGDHGALISIEGRETVESPFG
LFPRPWPSTLDTHELYFSEVVKKFVLLGKIVARAIQDGRVMDIYFSKAFYKLILGQEVSI
YDIQSFDPELGTALLEFQALVDRGKLLEFVCEENSSAKLEFCYHNTNIEDLCLDFTVPGY
PDYLLISSQDHTMVNTKNLEDYVSLVVDATLNSGISRQIDAFKSGFNQVFPIEHLQVFTA
EELERLICGEHDSWALNELLENVKFDHGYTASSPSIVNLLEIIQEFDNEHQRAFLQFVTG
APRLPSGGFASLNPKLTIVRKHSSNLVDSDLPSVMTCANYLKLPPYSSKEIMKEKLLYAI
TEGQGSFHLS
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgtggccaaaagcgtactgaaatggtggatagattaccggcagacaaacgg
gcttgcagttcactggaattcaggccaagctcgtctaattcgtctatgaaaatgcacgtg
acggtcattaattcaagtccaggctttcatgataatgacatggacacttcaccatctgct
tctgcctctagtcgttcagaaggagaatatgataaggattcagcctacggctcttgtgat
tctgatgatgcagaacaaaaacatagtgatcttcggaattatcagaggcaaagatcgtct
agtgatcatggacgattgaaaaggattttgtcaagcttgggtgaagaatctgagctgtct
gcacaaagaacactactagtggagctatgtgaagttttatcattctgtatggagaactca
ctatcgagcatgacatcagattcattatctatagttcttgtaaatctggtgaaacttgat
agcgacccggagatagtgcttttggctctaagggctataacttatttatgtgatgtttac
cccagatcttccagttttctagttcgtcatgatggagtacgtgccctctgtcagatgcta
ggagttattaagtatttggatgttgctgaacagtgtttgatagccttggaaaaaatatca
cgggaacaacctgtcgcctgcttagaggctggtgcagttatggctgttttaacttatatt
gattttttttctactagcatacaaaggactgctcttcgtactgtggtgaatgtctgcaga
aaacttccttctgagtgtccaccaactttgattgatgctgttcctatactatgcaatctc
cttcagtatgaagatgggcagctgtcagagaatgtggctttatgcatgattaaaatagtt
gagcgtgtcagtcaatcctgtgagcttttggatggtctctgtcatcatgggctgattcaa
caagtcattcaccttataaacttgaatagtcgaacgactttgtcccagaccacttacaat
gatttgcttggtgtacttgtcaaactatcttcaggatcaactgttgctttcaagactctt
tatgagctaaacattagcaacactttgaaggacatattatctgcttacaatctctcgcat
ggaatgtcttcttcatgttctgtagttgacgggcagcgcaaccaggtatgtgaagtcctg
aaattacttaacgagcttctccccactggagatgcaaatgcagaagaattgtccgaaaaa
gtatattttttagtcagtaatcccaagaaactgcagaagtttggcttggatgtacttcct
ttgcttgttcaggtggttagttctggtgcaaacttgtatgtttgttgtggctgcctaact
attatctacaagtttgtctgtttgggtgaatctggcatgcttgtcgagttgcttcagaac
accaatatttctagtttcctggctggagtatttactcgaaaagaccaccatgtgctgatg
ttagctttaaaaatcactgagattatcctgcaaaagctctctagtatattttttaaatca
tttgttaaggagggtgtttattttgcaattgatgcactgataaccccagagaagtataaa
cagttgattttcccagtgtttactggtgtccacccttcaattggttcatgtcaaaagtct
tcaagagaaaatgcaagatgcttatgttatgcctttttgagtggctgtttctcctcaacg
gaagaaacaggaaactgcaagcttgacaaggactctgtttatagtcttgcatatcacata
agaacccattatttttctgaagaattatgtgacactgataaaggagtgacagatattctt
caaaatcttcaaactcttgctggttctctagatgatctattgaacttgtccttaattaag
gaaactccagcgcaggatgaagaaaattgttatgctttattggcggagattatgtcaaag
ctgaagtgtggcgagcccatatccacctttgaatttatcgaaagtggaattgtcaagtca
tttataaattacctaactaatggtcagtatatgaggaaaaagggagaaccacaaattata
tctagacagttctcaattatggaaagaagatttgaggtttttgcaaggcttctcttatct
agtgcagaacccccgtctgaaagcttgccagttttggtcttgataaggaaattacaaacc
tcactgtcgtctttagaaaactttcctgttgtttctagccagggactcaaacacaggaat
tattttgctacggttccaaatggtcggtgcataccacatccttgtgtgaaagttcggttt
gtgagaggagacggggaaactgatctctgcaactatactggggatatccatactgttgac
cccttttcttctttgaatgccatcgaagggtttctgtggtccaaagttggcacaaaaaaa
gctgagcagtcctttgaagcagatagcctgagggaacatcaaattaaactcctctcaaat
gtatgttctggttggggtgttaacccaaaactagtagggtctgacagcatgtccacagat
ttgtctgaaactcagggatctacagaagttgacaccgatgagaaattacagtattctgta
tcttgcagtaagaaaggcatgaagcccaaattgttactttaccttgagggaaagcagctg
gagcccactttgacactttatcaggcaattcttcaacaacacatgaaagaaagtgaaact
gtttctgggacaaaattgtggaaccaagtatatactctaacatataaaagtgctggagaa
agtgaggacaacagttctaacgaattattttctgcgtcagacaaagctgcaacgttgaag
ttctcttcatttttccatggtctagattgtattctgccttctgacttggcaaaagaaagt
cctgcttatgatgttttatttcttctaaggagcatagagggcatgaacagaatggcattt
cacataatgtcacatgaaaggattcgtgcttttgctgaagggagaattaataccttggac
aatataaagctatcagttccttcagtgccgcagaatgaatttgtaaacagcaaactgact
gaaaaacttgaacagcagatgagggacttttctgcgttttctattggtggcatgccttta
tggtgtaaggaacttatggattcatgccctttcttatttagttttgatgctagatgcaag
tactttcggatagtagcattttccatgtcgcaccgccagccatatataagatcatacagt
gacttaaggacctcaaatgacgaacgatcaaattctggtggcttgcctcgtaagaaggta
ttagtacaccgcaacaaaattctagattctgctgtcaaaatgatggatcagtatgcacat
cagaaagtactgcttgaggtggaatacgatgaagaagttggcacagggcttggtccaaca
ttagaattctatactctcgtcggtcgtgaatttcagaagtatgaccttggaatgtggaga
ggggatcatggtgctcttatttccatagagggtagagaaactgttgaatctccatttggg
cttttccctcgtccatggccatcaaccctggatactcatgagctatatttttctgaagta
gttaaaaagtttgtacttctagggaaaattgtggcaagggccatccaagatggtagggtt
atggatatctacttctccaaagccttctataaattaatacttgggcaggaggtgagtata
tatgacatccaatcatttgatccagaacttggaactgctttgctcgagtttcaagctctg
gtcgacagaggtaaattgttagaatttgtctgtgaagaaaactcgtcggccaaacttgaa
ttttgttaccataataccaatattgaggatctttgccttgattttactgttcctggttat
cctgattatctcctgatctcatctcaagatcatacaatggtaaatacaaaaaatttggag
gattacgtctctcttgttgtagatgctactttaaattctggaatttcgaggcaaatagat
gcatttaaatctggatttaatcaggttttccccatagaacatcttcaagtttttactgca
gaagaattagagcgcttaatatgtggagaacacgactcttgggctttgaatgaactcctt
gagaatgtgaagtttgaccacggatatacagccagtagcccttccattgttaatctgctt
gaaattattcaagagttcgacaacgaacatcaacgagcatttctacagtttgtgacgggg
gcgccaaggcttccttctggaggctttgcatctctaaatccgaagttgactatagttcga
aagcattctagcaatctggttgattctgacttgcctagtgtgatgacctgtgcaaactat
ctaaagttgcctccgtactcttcaaaagagataatgaaagagaagcttttatacgccatc
acggaaggacaaggctcgtttcacctttcgtag
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integrated database retrieval system
