KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111801630
Entry
111801630         CDS       T05351                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111801630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111801630
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111801630
 Complex B
    111801630
 Complex C
   U2 SnRNP specific factors
    111801630
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N DUF2478
Other DBs
NCBI-GeneID: 111801630
NCBI-ProteinID: XP_023541453
LinkDB
Position
LG09:complement(176347..184449)
AA seq 508 aa
MSSTLLEVTRSSHEEVERLERLVVKELQNEPASGRDRLLQSHRVRNMIDTIVSTTDKLVE
IYEDKDNARKDEIAALGGQTTLGTNVFSAFYDRLKEIREYHRRHPAARVVDVNEEDGLLK
EEPQIEFSGEEAFGRYLDLHELYNQYINSKFGEAIEYSSYLDVFSQPQKISRKLKNSRQY
REYLENLLAYLTYFFQRTEPLQDLDRIFSKVESEFEEQWITGTIEGWENTVEDNGHDPAQ
LSLIDLDYYSSVEELVELGPERLKEGLAALGLKTGGTVQQRAERLFLTKHTPLQLLDKKH
FAKPSRQSFQNGAAAASLHNENLKQVALMEAKIEKLCDLLDETIDRTKDNIVKKQALTYE
EIEAEREEEETQAESESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN
YSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKRIQERQGVSKWRP
DLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcgtctacgctactagaggtgacccggtcttcgcacgaggaggtggagcgacttgag
cggcttgtagtgaaggagctccaaaatgaacctgcttccggccgggaccgtttgctacag
agtcaccgagtccgcaacatgatcgacaccatcgtgtccaccaccgacaagctcgttgag
atttatgaagataaggataatgccaggaaagatgagattgcggcacttggagggcaaaca
actttaggaaccaacgtttttagtgcattttatgatagactgaaagagattcgtgaatac
catagaaggcatccagctgcacgggttgttgatgttaatgaggaggatggtctactcaaa
gaggaaccacaaattgagttcagtggagaggaagcatttggacggtatcttgacttgcac
gaactctacaaccagtatattaattcgaaatttggagaggccatcgagtactcttcttac
ctggatgttttttcacagccccagaaaatctctcgcaaactaaagaattcaagacaatac
agggaatacttggagaatcttcttgcttatctcacttactttttccagcgtacagagccc
ttacaagatcttgatcgtatattctcaaaggttgaatctgaatttgaagagcaatggatt
accggtacaattgaaggatgggagaacactgtggaagataatggccatgatcctgcccag
cttagtcttattgatcttgactattatagctcagtagaagagctggtggagctaggtcct
gagagattgaaggaggggttggcagcattggggctgaagactggtggtacagttcagcag
cgtgcagagaggcttttcctcactaagcatacacctcttcaattgttggacaaaaaacac
tttgcaaaaccgtcccggcaatcatttcagaatggggcagctgcagcttcactacacaat
gaaaatttgaaacaagttgctctgatggaagcaaaaattgaaaaattgtgcgatcttctg
gatgagactatcgacagaaccaaagacaacattgttaagaagcaagccttaacatatgag
gaaattgaagcagaacgtgaggaggaagagacgcaagctgagtctgaaagtgatgatgac
gagcagcaaatttataatccgctcaagctcccaatgggttgggatgggaaacccatacct
tactggctctacaagcttcatggccttggtcaggaattcaaatgcgagatatgcgggaac
tatagttattggggtcgtagagcttttgagcgacatttcaaggaatggcgtcatcagcat
ggaatgcgttgccttggtattccaaatacaaagaacttcaatgaaatcacatcaattgag
gaggcaaaagacttgtggaaaagaattcaagaacgacaaggagttagcaagtggcgacca
gatctggaagaagaatacgaagataaggagggtaacatttacaataagaagacatataca
gatctgcaacgccaggggttgatataa

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