Cucurbita pepo subsp. pepo (vegetable marrow): 111802758
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Entry
111802758 CDS
T05351
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111802758
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111802758
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111802758
NCBI-ProteinID:
XP_023543015
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Position
LG09:2530192..2535028
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AA seq
502 aa
AA seq
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MFPVLSILLIWMSGLFFLVASASFNLTLPHQHPDPDSVADELQRTVNASISRRKALSIES
KDQAFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDSNP
ENPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQ
YVSNIIIHNIHVHHCVPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
CRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYVAPVNPNAKEVTRRLDAAETEWTA
WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSTEPKSVALINQLTMNAGVLGAPRYSNGE
GIVYPGFSGSTGGGNGGYGGGTVINNSPMYGNSGGGEDDFYGMIFKGGGNRVSPPWSPPM
ILCVQILVVLYIVTNNSGLLTL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgttcttagcattctcttgatatggatgtctggtttgttctttcttgtcgcc
tcggcttctttcaatctgacattgccccaccagcatcctgaccctgattctgttgctgat
gaacttcaaaggacagtcaatgcatcgatatcgagaagaaaagcgctatccatcgaatca
aaggatcaagccttctcttgcctcaccggaaaccccatcgatgattgctggcgttgcgac
ccaaattgggcggcgaaccggcagagactcgccgactgcggcatcggattcggccgcgac
gccatgggtggcaaaggcggcaagatctacatcgtcaccgactcctcagattccaacccg
gaaaacccaactccgggaaccctccgccacgccgtgatccaattcgaaccactctggatc
atcttctccgccgacatgacaatcaaactcaaatatgaacttatcatcaacagcttcaaa
acgatcgacggccgtggcgccaacgtccacatcaccggcggtggttgcatcactatccaa
tacgtgtccaacatcatcatccacaacatccacgtgcatcactgtgtaccctctggcaat
gccaacataaggtcaaccccaacccacgtcgggcaccgagggctatcggacggggacggg
atctcaatattcagctcaagaaaaatttggatagaccattgctcgctttcatactgcacc
gacgggctaatagacgcaataatgggatcgacaggtataacaatatcgaacagctatttt
tcgcaccacgacgaggtgatgctgctgggacacgacgaccggtacgtgcaggactcgggt
atgcaagtgaccatagcgttcaaccacttcggtgaggctctggtgcagcgcatgcccagg
tgcagacatggctacattcatgtggtcaacaatgacttcacggcttgggaaatgtacgcc
attggcggcagtgctcgccccactattaacagccagggtaaccgttatgtggctcctgtc
aaccccaatgctaaagaggtgacgagacgtttagatgcggcggagacggaatggacggcg
tggaattggcggacggacggtgatattttggtgaacggcgcgttttttgtgccgtccggt
gccggacttagcacccagtacggtaaagcctccagtactgagcctaagtcggtggctctt
atcaatcagctcactatgaacgctggcgttttgggtgccccaaggtatagtaatggtgaa
gggattgtatatccaggatttagcggcagcactggcggcggtaatggcggatatggcggc
ggcactgtcattaataatagcccgatgtatggaaatagcggtggtggagaggatgacttt
tacggaatgatatttaaaggcggcggtaacagagtatcgccgccgtggtcgccgccgatg
atcttatgtgttcaaattttagtagttttgtatatagtaacaaataatagtggtttattg
acgttatag
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