Cucurbita pepo subsp. pepo (vegetable marrow): 111804312
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Entry
111804312 CDS
T05351
Name
(RefSeq) DNA topoisomerase 6 subunit A
KO
K10878
meiotic recombination protein SPO11
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111804312
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
111804312
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
111804312
NCBI-ProteinID:
XP_023544835
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Position
LG10:complement(4785718..4789049)
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AA seq
420 aa
AA seq
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MADKRKRRRSELNPDGEVQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS
SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI
KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagagaaagcgccggcgatctgaactcaatccagacggtgaagttcaactt
cccttcaagaacagtctcaaatctgattctatcattcttcagattctcaaagagttcagt
gactgctccaccgccccatcttcctcttcatctaaaaccctcgacgacctaggcctctcc
tcctcctgccgcgaggtcaccgatctttcgctttcttccgtgcagtccacaattgaagat
cttatcctcaaaattgctcgttccattctttccggcaatggttttgcatttgatgttcct
tctcgatcggcggctaaccaattgtacgttccggagctcgatcggatcgttttgaaagac
aaaactgccatccgcccctacgccaatatttccactgttcggaagtccaccattactact
cgcattcttcagcttgtccaccaactttgcataaaaaacatccatgtgaccaagcgagat
ctgttctacacggatgtaaagctcttccaggatcagactcagtcggattctgtgcttgat
gatgtttcttgcattctcggctgtactcggtcgagtctcaatgtgattgctgcggagaaa
ggagtggttgtgggaaggctcattttcagtgacaatggggatatgatcgattgcactaaa
atgggcatgggcggaaaagcgattccgccaaatattgatagagttggagatatgcagagt
gatgcattgtttatcctcttagttgagaaagatgccgcgtatattaggttagctgaggat
aggttttacaatcgctttccatgtattattgtaaccgctaagggacaaccagatgtggcc
acgagattgttcttgaggaagatgaaaatggagctgaagctcccagtgcttgcgcttgta
gacagtgatccatatgggttgaagattctatctgtctatgggtgtggatcaaagaatatg
tcttatgacagtgctaatttgactactcctgatatcaagtggctaggaataaggccgagt
gatttggataaatataatataccggagcagtgcaggttacctatgacagagcaggatatt
aagactgggaaagatctgttagaggaagattttgttaaaaagaatccaggttgggttgaa
gagctcactttaatggtgaagacgaagcagaaggctgagattcaggcattgagctcattc
gggtttcagtatctgtcggaggtttatttgccattgaagctgcagcagaaggattggctg
tga
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