Cucurbita pepo subsp. pepo (vegetable marrow): 111810048
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Entry
111810048 CDS
T05351
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111810048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111810048
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111810048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
111810048
NCBI-ProteinID:
XP_023552354
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Position
LG14:complement(8686998..8699133)
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AA seq
790 aa
AA seq
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MITDGVEDEEKWLAAGIAGLQQNAFYMHRSLDSNNLKDALKYSAQMLSELRTSKLSPHKY
YDLYMRAFDELRKLEIFFMEETKRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVNDAVEFVL
QNFTEMNKLWVRMQHQGPARDKEKREKERSELRDLVGKNLHILSQVEGVDLDMYKDIVLP
RVLEQVVNCKDEIAQFYLMECIIQVFPDEYHLQTLDILLGACPQLQPSVDIKTVLSQLME
RLSNYAASSAEVLPEFLQVEAFSKLSKAIGKVIEAQADMPTVGVVTLYSALLTFTLHVHP
DRLDYADLVLGACVKKLSGKGKIEDSKATKQIVALLSAPLEKYNDIVTTLKLSNYSHVME
YLDGETIKVMATVIVQSITKNKTQISTAENVEALFELIRGLIKDLDGSPPDEVDEDDFKE
EQSSVARLIQMLYNDDPDEMFKIICTVKKHILTGGIKRLPFTVPALVFSSLKLVRQLQGQ
EENPFGDETATNPKKIFQLLTQTIEILSSVPAPELAFRLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSKAQVTALHLIIGTLQKMHVFGVENRDTLTHKATGYSAKLLKKSDQC
RAVYACSHLFWLDDHDNMKDGERVMLCLKRALRIANAAQQMSNATRGSTGPVSLFIEILN
KYLYFFEKGNPQITVATIQGLIELITTEMQSDSTSPDSSADAFFASTLRYIEFQKQKGGA
VGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgattactgacggagttgaagacgaagagaagtggcttgctgctgggatcgccggtctc
cagcagaatgccttctacatgcaccgatctctggactccaacaatctcaaagatgccctg
aagtattctgcgcagatgctgtctgagctacggacttcgaagctttcccctcataaatac
tacgatttatacatgcgagcgtttgacgagttgaggaagctagaaattttctttatggag
gagacgaagcggggttgctcaataatcgacttgtacgaacttgtgcagcatgctggcaac
atattgcccagactgtaccttctttgtactgtgggatcagtgtatatcaagtccaaggag
gctcctgcaaaagatattcttaaagatctggtcgagatgtgccgcggcattcagcatccc
ttacgtgggttatttttaaggagttatctttctcaagtcagtagggataagctacctgat
attggttcagagtatgaaggagatgcagacactgtgaacgatgcagttgaatttgtactc
caaaatttcacagaaatgaacaaactttgggtacgaatgcagcatcagggacctgcccgg
gacaaggagaaacgggagaaggaaaggagcgagctacgtgatcttgttggaaagaatctg
catattctcagtcaggtggagggtgttgaccttgatatgtacaaggatattgtacttcct
agagttttagagcaggttgttaattgtaaagatgaaattgctcaattttatttgatggaa
tgcattattcaagtatttcctgatgagtatcacttacaaaccctggatattttgttgggt
gcctgcccccaacttcagccatctgttgatatcaaaactgtgttgtcccaattaatggaa
aggctttcaaattatgctgcttcaagtgcagaagtgttaccagaattcttgcaagtcgaa
gctttctcaaaactgagcaaagccattgggaaggtgatagaagcacaggctgatatgcct
acagtgggagttgtaaccttatactcggcacttctcacatttacacttcatgttcatcca
gatcgtcttgactatgcagatcttgttttgggagcatgtgtgaagaaactctctggtaaa
gggaaaattgaagacagcaaggcaacaaagcagattgttgcccttttgagtgcgccattg
gaaaaatataatgacattgtcactacattgaagctatcaaactattcacatgtcatggag
taccttgatggtgaaacgatcaaagtgatggcaacagttattgtacaaagcataacgaag
aataaaactcaaatatctactgccgaaaatgttgaggcattatttgaattgataagaggg
cttatcaaggatttagatgggtctcctcctgatgaggttgatgaagatgatttcaaggag
gagcaaagttctgttgctcgtcttattcagatgttgtataatgacgacccagatgaaatg
tttaagataatctgtactgtcaagaagcatatcctgactggaggaataaagcgtctgcca
tttaccgttcctgcccttgttttttcatctctcaagttggttaggcaattgcaaggccag
gaagaaaatccttttggagatgagacagcaactaacccaaagaaaatttttcagctatta
actcagaccattgagatcctttcaagtgttccagccccagaattggcgtttcggttgtat
ctacaatgtgctgaggctgcaaatgattgtgatttagaacctgttgcttacgaatttttt
acccaagcatacattctttatgaagaagaaatttcagattcaaaagctcaagttactgca
ttacatttaataataggcactcttcagaagatgcacgtttttggcgttgaaaacagggat
actttaacccacaaagccactgggtactccgcaaagcttttaaaaaagtctgatcaatgc
cgagctgtttatgcttgctcgcatctcttctggcttgatgatcatgataatatgaaggat
ggtgagagggtgatgctttgcctaaagcgtgcattaagaatagcaaatgctgctcagcaa
atgtcgaatgcaacaaggggtagcaccgggccagtgtcgcttttcattgagatactgaac
aaatacttgtattttttcgagaagggcaacccgcagatcacggtagctaccatccagggc
ctaattgaattgatcacaactgaaatgcaaagcgacagtactagtccagattcatcggcc
gatgcattctttgccagcacgctccggtacattgagttccaaaagcagaaaggtggtgca
gtgggtgagaaatatgagcccataaaagtgtag
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