Corynebacterium phocae: CPHO_10660
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Entry
CPHO_10660 CDS
T05007
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cpho
Corynebacterium phocae
Pathway
cpho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPHO_10660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpho03021
]
CPHO_10660
03400 DNA repair and recombination proteins [BR:
cpho03400
]
CPHO_10660
Enzymes [BR:
cpho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPHO_10660
Transcription machinery [BR:
cpho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPHO_10660
DNA repair and recombination proteins [BR:
cpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPHO_10660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
APT93792
UniProt:
A0A1L7D764
LinkDB
All DBs
Position
complement(2344686..2348183)
Genome browser
AA seq
1165 aa
AA seq
DB search
MLEGPILAVSRQTKSVTKIPGAPKRYSFAKIDEPITVPGLLDVQLDSYSWLIGTPEWRER
EQELRGPDARVTSGLEDILNELSPIEDYSERMSLSLSEPRFEPVKYTVDESKEKDINYSA
PLYVTAEFVNKDTQEIKSQTVFIGDFPMMTDRGTFIVNGTERVIVSQLVRSPGVYFDQTI
DKSTERPLHAVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTEEQIRER
FGFSELMMSTLEGDGVANTDEALLEIYRKQRPGEQPTRDLALAMLANSFFKAKRYDLARV
GRYKINRKLGLGGDHDGLMTLTEEDIAVTLEYLVRLHAGEREMKAPNGQMIPLNTDDIDH
FGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFG
TSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASYARVNPFGFIETPYRKVEDGRITDEVVYVTADEEDRYAIAQAEVERDEQG
YITDSRIEVRLKEGDIGVTDAKGVDFIDVSPRQMVSVATAMIPFLEHDDANRALMGANMQ
RQAVPLVRSEAPFVGTGMEQRAAYDAGDLIINAKDGVVEAVSAQSITIMDDSGQRDTYLL
RKFERTNQGTNYNQTPLVSAGDRVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYE
DAIILNQQIVEDDTLTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLRDLDDRGIIRI
GADVRPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVAR
FSRDEDDDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPPEDMPFMEDGTP
VDIILNTHGVPRRMNIGQVLEVHLGWLAHSGWKIDVEDPKNAEILKTLPEELYDVPADSL
TATPVFDGATNEEISRLLASSRPNRDGDVLVDEHGKARLFDGRSGEPYKYPVSVGYMYML
KLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLAVDGTPMELSGSD
DDDMDSPSLGINLSRDERSDADNIA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcgcgccagaccaagtcagtgacaaagattccg
ggagccccgaagcggtactcgttcgcaaagatcgacgagcctatcaccgttccgggtcta
ctcgacgtacaactagattcctattcgtggcttatcggcacgcctgagtggcgtgaacgt
gagcaggagttgcgtgggcctgatgcccgcgtgaccagcggcctggaagacatcctgaat
gagctctcgcccattgaggactattccgagcgtatgtcgctatccctgtctgagcctcgc
tttgaacccgtgaagtacacggttgatgaaagcaaggaaaaagatattaactactccgcg
ccactgtatgtgaccgcagagtttgtcaacaaagacacccaggagattaagtcccagacg
gtgttcattggtgatttcccaatgatgaccgaccggggcaccttcattgtcaatggcacc
gagcgtgtcattgtttcgcagttggtgcgttcccctggtgtttactttgaccagacaatc
gataagtctacggagcgcccgctgcacgccgtgaaggttattccttcccgcggtgcgtgg
ctggagtttgacgtggacaagcgcgacaccgttggtgtccgtattgaccgtaaacgtcgc
cagccggtgactgttttgctcaaggcccttggttggaccgaggagcagatccgggaacgc
tttggtttctccgagcttatgatgtctaccctggaaggcgacggcgttgccaacacggat
gaggcattgctggagatttaccgtaagcagcgcccgggtgagcagcctacgcgtgatctg
gcgttggccatgttggccaactcattctttaaggctaagcgttatgatctggctcgtgtg
ggccgttacaagatcaaccgcaaacttggcctgggtggggaccatgatgggcttatgacc
ttgaccgaggaagacattgccgtcaccctcgagtacttggtgcgtctgcatgccggtgaa
cgggagatgaaggcccctaatggccagatgatcccgctgaacactgatgatattgaccac
tttggtaaccgccgcctgcgtaccgttggtgagcttatccaaaaccaggttcgcgtgggt
ctatcccgtatggagcgcgtggttcgcgagcgcatgaccactcaggacgcggaatccatt
actcctacctcgctgattaacgttcgtccggtgtctgcagctatccgggagttctttggt
acttcccagctctcgcagttcatggaccagaacaactctttgtctggtttgacgcacaag
cgtcgcctttctgcgctgggtccaggcggcctgtcgcgtgagcgcgccggcattgaggtt
cgtgacgttcacccttctcactacggccgtatgtgccctattgagactcccgaaggtcct
aacattggtttgattggctcgctggcttcttatgcccgcgtgaacccgtttggcttcatt
gagaccccttaccgcaaggttgaggacggccgtatcactgacgaggtcgtctacgttacc
gctgacgaggaagatcgctacgcgattgcccaagccgaggtggagcgtgatgagcagggc
tacattaccgacagccgcattgaggttcgcctcaaagagggtgatatcggtgtgactgac
gccaagggcgttgacttcattgacgtctccccgcgccagatggtttccgtggcaaccgcc
atgattccgttcttggagcacgacgacgccaaccgtgcactgatgggcgccaacatgcag
cgccaggcagtgccgctggtccgctccgaggccccgtttgtgggcaccggcatggagcag
cgcgccgcgtatgacgccggtgacctcatcatcaacgccaaggacggcgtggtggaggct
gtgtccgcacagtcgatcacgatcatggatgactctggccagcgcgacacctatttgctg
cgcaagtttgagcgcaccaaccagggcaccaactacaaccagaccccgctagtttctgcg
ggtgaccgtgtagaggccggccaggttttggccgatggtcctggtacccacaacggtgag
atgtccctgggccgcaacctgctggttgcgtttatgccttgggaaggtcacaactacgag
gacgccatcatcctcaatcagcagattgtggaggatgacacgcttacttccatccacatc
gaggagcacgagatcgatgcccgcgacaccaagcttggtgctgaggaaatcactcgcgaa
atccccaacgtctctgaggacgtcctgcgcgacttggatgaccgcggcattatccgtatt
ggcgcagatgtccgccccggcgacatcctggtgggtaaggtcacgcctaagggtgagacc
gagctgactccggaggagcgcctgctgcgcgccatcttcggtgagaaggctcgcgaagtc
cgcgacacctccatgaaggttcctcacggtgagaccggcaaggttattggcgttgctcgt
ttctcccgtgatgaagatgatgatttggcgcctggcgtcaatgagatgatccgcgtctac
gttgcccagaagcgtaagatccaggacggcgataagctggctggccgccacggcaacaag
ggtgtggtgggcaagattcttcctccggaagacatgccgttcatggaagatggcacgcca
gtagacatcatcctgaacacccacggtgttcctcgtcgtatgaacattggccaggtgctg
gaagttcacttgggctggttggctcactccggttggaagatcgatgttgaggatccaaag
aacgcggagattttgaagaccctccctgaggagctttacgacgtcccggctgattctttg
accgccaccccggtattcgacggtgccaccaatgaagagatttctcgtttgctggcttcc
tcgcgtcctaaccgcgatggtgatgttctggtggatgagcacggcaaggcccgtctgttt
gacggccgttccggtgagccttataagtacccggtttccgtgggctacatgtacatgctc
aagctgcaccacttggttgatgagaagattcacgctcgttctaccggtccttactccatg
attacccagcagccgctgggtggtaaggcccagttcggtggccagcgcttcggtgagatg
gaggtgtgggcaatgcaggcatacggcgctgcttacaccctgcaggagctgctgaccatc
aagtctgatgacgtggtgggccgtgtgaaggtctacgaggcaatcgtgaagggcgacaac
atcccagacccgggtattccggagtccttcaaggtgttgctcaaggaactgcagtctttg
tgcttgaacgtggaagttcttgccgttgacggcactccgatggagctttccggctccgat
gatgacgacatggactctccatccctgggcattaacctgtcccgcgatgagcggtccgac
gccgacaacatcgcttag
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integrated database retrieval system
