Chitinophaga pinensis: Cpin_3339
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Entry
Cpin_3339 CDS
T00959
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
cpi
Chitinophaga pinensis
Pathway
cpi01501
beta-Lactam resistance
cpi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cpin_3339
01503 Cationic antimicrobial peptide (CAMP) resistance
Cpin_3339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpi02000
]
Cpin_3339
01504 Antimicrobial resistance genes [BR:
cpi01504
]
Cpin_3339
Transporters [BR:
cpi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Cpin_3339
Antimicrobial resistance genes [BR:
cpi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cpin_3339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
OEP
MMPL
SecD_SecF_C
Patched
PheRS_DBD2
Motif
Other DBs
NCBI-ProteinID:
ACU60806
UniProt:
A0A979G4W9
LinkDB
All DBs
Position
complement(4103994..4108586)
Genome browser
AA seq
1530 aa
AA seq
DB search
MFDTFIKRPVLSLVISLIIVLLGLLALFTLPVTQFPDIVPPSVTVTAKYTGANAEVCAKA
VATPLERAINGVPGMTYMSSVSSNNGITLIQVFFNVGTDPDQAAVNVQNRVATIIDELPE
EVIKAGVTTEKEVNSMLLYLNVMSEDSTLNEQFIYNFADINVLQELKRIDGVGFAEIMGA
KEYAMRVWLKPDRMLAYNLSADEVISGIRKQNIEAAPGKTGESADNDPQVLQYVLRYTGK
FFDPAQYENIILRANPDGSVLKLKDVADVTFGALSYGMVSKTDGKPSASIMLKQRPGSNA
QEVIANVKTRMAELKVSTFPPGMSYNFNYDVSRFLDASIHEVLRTLIEAFILVFIVVYLF
LQDFRSTLIPALAVPVALIGTLCFMQMLGFSINLLTLFALVLAIGIVVDNAIVVVEAVHV
KMQETHLPPLEATLAAMREISGALVAITLVMSAVFVPVAFLSGPVGVFYRQFSLTLAIAI
VISGINAVTLTPALCAIMLRHNHDAGKKKSLLQRFFDKFNFGYNKTERSYSKLVGYIAGR
KMITFVLMIVFFIATWGASAILPGGFIPSEDQGMIYVNVTTPAGATVARTEAVLDQVQQI
AARLPEGESVSTLAGFSLVNDVAGASYGMGMINLKPWEERKRSVKEIIAALEKETRNIGD
ASIEFFPPPTVPGFGNSSGFELRVLDRSGSGDLRQTADVTNKFIAELKKRKEIGSAFTSF
DPDFPQYMIHVDQAMAAKKGVSVENAMSTLQTLLGSFYASNFIRFGQMYKVMVQASPRYR
TKPEDVMHLYVKNDTGEMVPFSNFIRMERVYGPEQLTRYNMYTAAMINGDAAPGFSSGDA
IKAIEEVAAKSLPRGFAFEWSGMTREQILSGNQAVYVFALCLLFVYLLLAAQYESFLLPL
PVILSLPAGIFGAFITLKMAGLENNIYAQVALVMLIGLLGKNAILIVEFAILRTKQGLSV
LEAAKEGAVSRLRPILMTSFAFIAGLIPLCIASGAGAMGNRSIGTAAAGGMLIGTVFGVL
IIPGLYVLFASIGSKKKTRPQTPKHAVGALTVLLIAGLLTGCYTPSKVIFPDAPQAPQAF
SNPVNDSNKVATADSSSIATISYKQFFTDSLLQQLLDTALRNNTDMLIATQRMETARAQL
MAARRAWTPEVNAVVSAGVDRWGDYTLNGVGNYDTNLSPNIDDKQRIPGPTPDYFVGLRS
SWEIDLWGKMRSRKKAAMLRFMSSEQGRQLISTQLISQVAGMYYQLMVLDYEQQVILRNI
ALQESALATVQIQQEAGRATLLAVQQFNAQLLNTRSMSLGLRQQTLELENQLNALLGRFP
QSIKRDSALLTMPLPPFARTGVPAGMLALRPDIRQAALELEAAKADIHAAKASFLPSLNI
TPYLGLNSFNAGTLFNTPASVAYGVLGGLSAPLLNRQQLRSQYNITTAAGMTAFYDYRQR
VINGYQEVISALGKIQNGQEAYTLKEAEVEMLKNGVSTANVLYATGYANYLEVITAQKSV
LEAELALAGNKKELLLGTITLYRALGGGRQ
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacttttatcaaacgaccagtattgtcgctcgtgatctccctgatcatcgtc
ctgcttggattgctggcgttatttacattacctgttacacaattcccggatatcgttcct
ccatccgtaacggtgaccgccaaatataccggcgccaatgccgaagtatgcgccaaagcc
gttgctacaccactggaacgcgccatcaatggtgtgccgggtatgacctatatgtcttct
gtttccagtaataacggtatcacccttatacaggtcttcttcaatgtaggtactgacccc
gatcaggcggcagtaaacgtacagaaccgcgtagcgaccatcatcgatgaattgccggaa
gaagtgatcaaggcgggtgtgaccaccgaaaaagaggtcaatagtatgctgctctacctc
aacgtaatgagtgaagacagtacgctcaacgaacagttcatctacaacttcgctgatatc
aacgtcttacaggaactgaaaaggattgatggtgttggttttgcggagatcatgggtgca
aaggaatatgcgatgcgcgtatggcttaaacctgaccgtatgctggcctataatctctcc
gcggatgaagtgatcagtggtatccgtaaacagaacattgaagcagcgcctggtaaaaca
ggtgaaagtgccgataatgatccacaagtattacaatacgtactccgctataccggtaaa
ttctttgaccctgcacaatacgaaaatatcatcctcagagcaaatccggatggttccgta
ttaaaactgaaagatgtggcggacgtcactttcggcgccctcagctacggcatggtatct
aaaacagatggtaagccctctgcctctatcatgctgaaacaacgtcccggctccaacgca
caggaagttattgccaatgtgaaaacacggatggctgaattaaaggtcagcaccttcccg
ccgggtatgagctataacttcaactatgatgtatcccgtttcctggacgcttcaattcat
gaagtactacgaacattgatagaggcatttatcctggtgtttatcgttgtatatctcttc
ctgcaggacttccggtctacactgatcccggcgctggctgtgcctgtagcactgatcggt
accctgtgttttatgcagatgctgggcttctccatcaacctgctgacactgttcgcactg
gtgctcgccatcgggatagtcgtcgataatgccatcgtggtggtagaagcagtgcacgtc
aagatgcaggaaacccatctgccaccattggaagctacgctcgccgccatgagagagatc
agtggagcactggtagcaatcacgctggtcatgtctgctgtatttgtacctgtggcattc
ctttctggtccggtaggtgtgttctaccgccagttctcgctcacactcgctattgcgatt
gtgatatcaggtatcaatgccgttacgctgacacccgcactgtgtgctattatgctgcgt
cacaaccacgatgcgggtaagaagaaaagtttgctgcaacgcttctttgataaattcaac
ttcggatataataaaacagaacgcagctattcaaaactggtcggttacatcgccggcaga
aagatgatcacgtttgtactgatgatcgtcttctttatagctacctggggcgcaagcgct
attctgccgggcggtttcattccttcggaagaccagggtatgatctacgtaaacgtaacc
acacctgccggcgccaccgtggcccgtacagaagcagtactcgatcaggtgcaacaaatc
gctgcacgtctgccggaaggagaatctgtgtctaccctggcgggattcagtctggtgaat
gatgttgctggtgcttcttacggtatgggtatgatcaacctgaagccctgggaagagcgt
aaacgctccgtgaaagagatcattgctgcactggaaaaagaaaccaggaatataggtgat
gccagtattgaattcttcccgcctcccacggtaccgggttttggtaactcaagtggtttc
gaactgcgtgtacttgaccgtagcggtagtggcgatctgagacaaacggcggatgtgacc
aataagtttatcgccgaactgaagaaacgtaaagaaatcggtagtgcatttaccagcttt
gaccccgatttcccgcaatatatgattcatgtggatcaggcgatggccgccaagaaaggc
gtaagtgtagaaaatgccatgtccaccctgcaaaccttgctgggtagtttttacgcctcc
aacttcatccgtttcggacaaatgtataaagtcatggtacaagcctctccgcgttatcgt
acgaaaccggaagatgtgatgcacctctatgtaaagaatgatacgggggaaatggtgccg
ttctccaactttatccgcatggaaagagtgtacggtccggaacagctgacccgttacaat
atgtacaccgcggccatgatcaacggtgacgcggcaccgggctttagtagtggcgatgcc
atcaaggcgattgaagaagtagccgcaaaatcacttccacgtggctttgcctttgaatgg
agtggtatgacaagagaacagatcttatcgggtaatcaggcggtttatgtctttgccttg
tgtctgttattcgtatacctgttgctggctgcacagtatgaaagtttcctcttaccgtta
ccggtgatactttccctgccggcaggtatattcggcgcctttatcaccctgaaaatggcc
ggactggaaaacaacatctatgcacaggtggcattagtcatgctgatcggattgttgggt
aagaatgccatcctgatcgtggagtttgccatcctgcgtaccaaacagggactctctgtg
ctggaagctgccaaagaaggggccgtatcacgtctgcgcccgatcctgatgacctccttt
gcattcattgccggtctgatccctttatgtatcgcaagtggtgcaggtgcgatgggcaac
cgttctatcggtacggctgcagcgggtggtatgttgatcggaacggtgttcggcgtactg
atcatcccgggcttatatgttttattcgcttctattggcagtaaaaagaagaccaggcca
cagacaccaaaacatgcggtaggcgcattaacagtgttactgatcgcaggtctgctgacc
ggttgttatacgccatccaaggtgatcttccctgatgcacctcaggcaccacaggcgttc
agcaatccggtgaacgacagcaacaaagtggcgaccgccgatagcagcagtatcgctact
atatcttacaagcagttcttcaccgattccctgctgcaacaattactcgataccgccttg
cgtaataataccgacatgctgatagcgacacagcggatggaaacggcccgtgctcagctg
atggcagcccgtcgtgcctggacgccggaagtaaatgcagtagtaagtgctggtgtggat
cgctggggagattacacactgaacggcgtaggtaactacgatacgaacctctcacccaat
attgacgataaacaaagaatacccggacctacacctgattactttgtaggattgcgtagt
tcctgggaaatagacctctggggaaaaatgcgaagccgtaaaaaggcggccatgctgcgg
ttcatgtccagcgaacagggacgccagctgataagcacacaattgatctcgcaggtggcc
ggcatgtactatcagctcatggtactggattacgagcagcaggtgatattgcggaatatt
gctttacaggagtctgcactggcgacagtacagatacagcaggaagcaggccgggccact
ttactcgcggtacaacaattcaatgcgcaattgctcaatacccgcagcatgtcactggga
ctccggcaacagaccctggaactggagaatcagctcaatgccctgctgggccgtttcccg
caaagcatcaaacgcgattctgcactgctgacaatgccactaccaccgtttgcccgaacg
ggtgttccggcaggtatgctggcactccggccagacatccgacaggcggcattggaactg
gaagccgccaaagcagacattcatgcggcgaaagcatctttcctgccatcactgaatatc
acgccttacctgggcctgaattcatttaacgcgggcacactgttcaacacgcctgcttct
gtagcctatggagtactgggtggtttatcagcgccattgctgaacagacaacaactgcgt
tcgcagtataatatcacgacagctgctggtatgactgccttttatgactacagacagcgg
gtgatcaatggctaccaggaagtgatatcagcattgggtaagatacagaacggacaggaa
gcctatacgctgaaggaagcagaggtagaaatgctgaagaacggtgtttccacagctaat
gtcctatacgccacaggttatgctaattacctggaggtgatcactgcacaaaaaagtgta
ctggaagctgaactcgcattggccggtaataaaaaagaattattgttggggaccatcacc
ctatatagggcgctgggcggaggaagacaataa
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integrated database retrieval system
