Chrysemys picta (western painted turtle): 101941550
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Entry
101941550 CDS
T04662
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpic04040
]
101941550 (SCN2A)
Ion channels [BR:
cpic04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101941550 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
GPHH
PKD_channel
IQCJ-SCHIP1
ATP-synt_B
IQ
HB_ELP1
Neur_chan_memb
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
101941550
NCBI-ProteinID:
XP_008176747
LinkDB
All DBs
Position
Unknown
AA seq
1982 aa
AA seq
DB search
MAQSVLVPPGPDSFHYFTRESLAAIEQRIAEEKAKKSKKERKDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSAASAVYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLVKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTLEINVISYFNSTM
GENGTFVNTTVSTFNWEEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAVAADSREFSGVGG
VGGFSESSSEASKLSSKSAKERRNRRKKRKQKEQSEGEEKDEEDFHKSGSEDSIRRKGFR
FSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSRTSLFSFRGRAKDVGSENDFADDEH
STFEDNESRRGSLFVPHRHGERRNSNISQASRSSRMVPVLPANGKMHSTVDCNGVVSLVG
GPPALTSPGQLLPEGTTTETELRKRRTSSYHVSMDFLAEPSARQRAMSLASILTNTMEEL
EESRQKCPPCWYRFANTCLIWDCCTQWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAM
EHYPMTEQFSHVLSVGNLVFTGIFTAEMFLKIVAMDPYYYFQEGWNIFDSIIVSLSLMEL
GLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAM
CLIVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYVK
RKAHEFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTVIEIGKDLNYLKDRNGTTSGV
GSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNAS
SSSEGSTVDIGLPQEGEQPEIEPEEALEPEACFTEGCVRKFKCCQVSIEDRKGKIWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTNDERFDIS
QINNYSQCEDLINNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVL
DQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSDE
MQNNLWWINLVFIVLFTGECILKLISLRYYYFTIGWNIFDFVVVILSIVGMFLADLIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPYKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAA
SLDPPLLLAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDTLRIQMEDRF
MAANPSKVSYEPITTTLKRKQEEVSAVIIQRAFRRYLLKQKLKKVSSMFNQDKDKDEDDL
PIKEDMIIDKLNENSTPEKTDMTPSTTSPPSYDSVTKPDKEKYEKDKSEKEDKDKDIRDG
KK
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccactatttcacaagagag
tcacttgcagctatcgaacaacgtattgctgaagaaaaagctaagaagtctaaaaaagaa
cgtaaagatgatgatgatgaaaatggaccaaaaccaaatagtgatctggaggcaggaaag
acactgccatttatttacggcgacatacctccaggaatggtgtccgagcccttggaggat
ctggacccatattatatcaataaaaaaacttttatagtattgaatagagggaaggcaatc
ttccgattcagtgctgcctctgccgtgtacatgttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattgttcagcatgcttattatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccggagtggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttgtaaaaattcttgcaaggggcttctgt
ttagaagattttacttttcttcgagacccatggaattggctagatttcactgtcattaca
ttcgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctcattcagtctgtgaagaagctctcagatgtaatgatcttgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggcacaaatgcttgcag
tggcctccagacaattctactttggaaataaatgttatttcctactttaatagcacaatg
ggcgaaaatggaacatttgttaatacaacagtgagcacatttaattgggaggaatacatc
gaggatagaagtcatttttactttttggaaggtcaaaatgatgctctgctgtgtggcaac
agttcagatgcaggtcaatgtccagaaggatatatatgtgtaaaagctggtagaaatccc
aactatggctacacaagctttgacacattcagctgggcgtttttgtcactctttcgactg
atgactcaggacttttgggagaatctttatcagctgacgctacgtgctgctggcaaaaca
tacatgatatttttcgttctggtgattttcctgggttctttctatctgattaacttgatc
ctggctgtggtcgccatggcctatgaagagcagaatcaagcaaccatggaagaagcagag
cagaaggaggcagaatttcagcagatgcttgaacagctgaaaaaacaacaagaagaagct
caggcagcagcagcagctgcagtagcagctgattcaagagagttcagcggagtaggtggg
gtaggaggattctctgaaagttcttctgaagcatcgaagttgagttcaaagagtgctaaa
gagagaaggaacagaaggaagaagagaaaacagaaggagcagtctgaaggagaggagaaa
gatgaggaagattttcacaaatctggatcagaagatagcatcagaaggaaaggtttccga
ttctccattgaagggaacaggctgacatatgaaaagaggttctcttctccacatcagtct
ttgctgagcattcgtggctccctgttttccccaaggcgcagcagcagaacgagtcttttc
agcttccgaggtcgagcaaaggatgtaggatcagaaaatgactttgccgatgatgaacat
agcacttttgaagacaatgagagtagaagaggttctctctttgttccacatagacatggt
gaacggcgcaacagtaacattagtcaggccagtaggtcatccaggatggtaccagtgctt
ccagcaaatgggaaaatgcacagcactgtagattgcaatggagtggtttctttagttggt
ggacctccggctctcacgtcacctggacagcttcttccagagggcaccacaacagaaaca
gaattaagaaagagacggacaagttcttaccatgtttctatggatttcctggcagagccc
agtgcaaggcaaagagcaatgagtttagccagcatactcacaaacacaatggaagaactt
gaagaatccaggcagaaatgcccaccatgctggtatagatttgctaacacatgcttgatc
tgggattgctgcactcaatggttaaaagtaaaacatattgtaaatttgattgtgatggat
ccatttgtcgatcttgctattactatctgcattgttttaaacacattgtttatggccatg
gagcattatccaatgacggaacagtttagtcacgtgctttcagtaggaaatctggtcttt
actgggatcttcacagcagaaatgtttctcaagatagttgccatggatccttattattat
ttccaagaaggctggaatatttttgatagtattattgtgagcctcagtttaatggagctt
ggtcttgcaaatgtggaaggattatctgttctcagatcattcagattgcttcgagttttc
aagttggcaaaatcttggccaacactgaatatgctgataaagattattggtaactcagtg
ggggctttgggaaatttgaccttggtgctggccatcattgtcttcatttttgctgtggtt
ggtatgcagctgtttggtaaaagctacaaggaatgtgtctgcaagatctccaatgactgt
gaacttccacgctggcacatgcatgacttcttccactctttcttgattgtgttccgagta
ctatgtggagaatggatagagactatgtgggattgtatggaggttgcggggcaagccatg
tgccttattgttttcatgatggtcatggtgattggaaacctagtggtactcaacctcttt
ctggccttactgctgagctcatttagttcagacaaccttgcggctacagatgatgataat
gaaatgaacaatctccaaattgcagtggcaaggattcagaagggaatagattatgtgaaa
agaaaagcacatgaattcatccaaaaagcctttgttagaaaacagaaagctttagatgaa
atcaagcctcttgaagatctaaacaacaaaaaagacagctgtatttccaaccatactgtc
atagaaataggtaaagaccttaactatcttaaggataggaatggaactaccagtggcgta
ggcagcagcgtggaaaaatatgtcgtcgatgaaagtgattacatgtcattcataaacaat
ccaagcctcactgtgacagtaccaattgctgttggggaatcagattttgaaaatttaaat
acagaagagtttagcagcgagtcagatctagaggaaagcaaagagaagctaaatgcatcc
agctcatctgagggtagtacagttgatattggacttcctcaagaaggagaacagccagag
atagaacctgaagaagctcttgaaccggaagcctgttttacagaaggctgtgtacggaag
ttcaagtgctgtcaagtcagcatagaagatcggaaaggaaaaatatggtggaatcttagg
aaaacctgctacaagatagttgaacacaactggtttgagaccttcattgtcttcatgatt
ctcctcagcagtggtgctctggcttttgaagatatatacattgaacagcgcaagactatc
aagaccatgctggaatatgctgataaggtcttcacttacatcttcattctggaaatgctt
ctaaaatgggttgcttatggttttcaaacctatttcactaatgcctggtgctggctggac
ttcctgatcgttgatgtctctttggttagcttaacagctaatgccttgggctactcagaa
cttggtgcgattaaatcccttaggacattaagagctttgagacctctaagagccttgtca
cgatttgaagggatgagggtcgttgtgaatgccctcttaggagcaattccatccattatg
aatgtgcttcttgtttgtcttatattctggctaatcttcagcatcatgggagtaaatctg
tttgctggcaaattctactactgtgttaataccacaaatgatgagaggtttgatatcagc
caaatcaacaattatagtcaatgtgaggacctcataaacaacaatgaaacagccagatgg
aaaaacgttaaagtaaactttgataatgtaggacttggctatctttctctgcttcaagta
gccacatttaaaggatggatggatataatgtatgcagctgtggattctcgaaatgtattg
gatcagcctaagtatgaggacaacctgtacatgtatctttactttgtcatctttatcatc
tttggatcattctttaccctgaatcttttcattggtgtcatcatagataatttcaaccag
caaaaaaagaagtttggaggccaagacatctttatgacggaagaacagaagaaatattac
aatgcaatgaaaaagctgggttcaaagaaaccacaaaaacctatacctaggccagcgaac
aaattccaaggcatggtctttgattttgtgacaaaacaagtatttgacatcagcatcatg
attcttatctgccttaacatggtcaccatgatggtagaaacagacgaccagagtgatgag
atgcaaaataatttatggtggattaaccttgtgttcattgtccttttcactggagaatgt
attctgaaactgatttcacttcgttattactatttcaccataggctggaacatttttgat
tttgtagttgtcattctctctatagtaggtatgtttctagctgacctgattgaaaaatat
tttgtgtcccccaccttgttcagagttatccgactcgccagaataggtcgaatcctgcgt
ctcattaagggtgctaaagggatccgcactctgctttttgctttgatgatgtctcttcct
gctttgtttaacattggtctcctgcttttcctggtcatgtttatctatgctatatttgga
atgtccaactttgcctacgttaagagggaagttggtattgatgacatgttcaactttgaa
acttttggcaacagcatgatctgcctatttcaaattaccacatcagctggttgggatggt
ttgttagcaccaattctgaacagtggagaaccagactgtgacccttacaaagatcaccca
ggaagctcggttaaaggagactgtggtaacccttcagttgggattttcttttttgtcagt
tatattatcatctcatttttaagtgaggatgactttgagatgttctatgaggtttgggaa
aagtttgatccagatgccacccagttcatagagttcagtaaactgtctgattttgcagct
tcactggatcctcctcttcttttagcaaaaccaaacaaagttcagcttattgcaatggat
ctgcccatggtgagtggtgacagaattcactgccttgacatcttgtttgcttttacaaag
cgtgttttgggggaaagtggagaaatggatacacttcgaatacaaatggaagatcggttt
atggcagcaaatccttctaaagtttcctatgaaccgattacaaccacattaaaacgaaaa
caagaggaagtatctgctgtcattattcagcgagctttcagacgttaccttttaaagcaa
aaacttaaaaaagtttcaagtatgtttaaccaagataaagataaagatgaggatgacctg
cctatcaaagaagatatgattatagataagctaaatgagaactccactccagaaaaaaca
gatatgaccccttccacaacctctccaccttcctatgatagcgtaacaaagccagacaaa
gagaaatatgaaaaagacaaatcagaaaaagaagacaaagataaagacatcagggacggt
aaaaagtga
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integrated database retrieval system
