Culex pipiens pallens (Northern house mosquito): 120413103
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Entry
120413103 CDS
T07310
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
3.6.4.13
]
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120413103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120413103
Spliceosome [BR:
cpii03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120413103
Complex C
U5 SnRNP specific factors
120413103
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
120413103
NCBI-ProteinID:
XP_052564090
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All DBs
Position
2:101234674..101237442
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AA seq
815 aa
AA seq
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MSGVRKRRSRSRERMDLDRDRGFPRDRPQQRDRNYGNDRDLDQRDNRGRGHRSPPPMRGD
RGDRGQDLGGRKRSRSRERERDDKRKRDERKSEADPDVEEVKAEVKPTVGGSKKEPLSLE
ELLAKKKAEEEARSKPKFITKEQRAAEALKRRQEEVAAMKAAQASNVPKFGDVPVTALLN
REKRDPLEKYDRRERERERERERMERIRNREREGKGKDGEGDDKGGRGAVVEENPVKDKE
KETEAIRERYLGIIKKKRRVRRLNDRKFVFDWDAAEDTSVDYNNLYKERHHVQFFGRGNI
AGIDIKEQKRKQSKFYGDLLEKRRTDAEKEQEKVRLKKVKKKEDKQKWDDRHWSEKEVDE
MTERDWRIFREDYNVTIKGGKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPI
GLQNRDIIGIAETGSGKTLAFLIPLLNWIQGLPKIERQETADQGPYAIILAPTRELAQQI
EEETQKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCT
YIVMDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDATKLMENFNTKKKYRQTVMF
TATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVHIVTENEKRKKLMEILSRGVEP
PCIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQREYALASLKNGSKDILVATDVAG
RGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFCTKDDSHLFYDLKQIIVA
SPVSSCPPELMNHPDAQHKPGTVVTKKRREEKIFA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgttcggaagcgccgctcgcggtcccgcgaacgcatggacctggacagagac
cgtggattcccgcgtgatcgtccacagcagcgcgatcgcaactacggcaacgaccgggac
ttggaccagcgggacaaccgaggccgaggccaccgcagtcctccaccgatgaggggagat
cgcggggaccgtggccaggatttgggcggcaggaagcgatcacggtcgcgggaacgcgaa
cgggatgataagcggaagagagacgagcgcaagtccgaggcagatccggatgtggaggag
gttaaggcggaggtgaaaccgacggtgggtggttcgaagaaggaaccactttcgctggag
gaactgctggcgaagaagaaggcggaggaggaggctcggagcaagccgaagtttatcacg
aaggagcaacgggcggcggaagcgctgaagagacggcaggaggaagtggccgcgatgaag
gcggcgcaggcctcgaatgtgcccaaatttggggacgttccggtgacggcgctgttaaat
cgggagaagcgagatccgctggagaagtacgaccggagggagagggagcgggagcgtgaa
cgggagagaatggagaggattcggaaccgtgaacgtgagggcaaagggaaggatggggag
ggggatgataagggtgggaggggagcggtggttgaggagaatccagttaaggataaggag
aaggaaacggaagcgattcgagagcggtatttgggaataatcaagaagaagcgacgcgtg
cgaaggttgaacgaccggaagtttgtgtttgattgggacgcggcagaggacacttcggtg
gattacaacaatctgtacaaggagcgacaccacgtgcagttctttggccgcgggaacatt
gccgggattgacatcaaagagcagaagcgaaagcagagcaagttttacggagatttgttg
gagaagcggcgaaccgacgccgagaaggagcaggagaaggtccggttgaagaaggtcaag
aagaaggaggacaaacaaaagtgggacgaccggcactggtcggagaaggaagtggacgag
atgacggaacgtgattggcgtattttccgagaggattacaacgtaacaattaagggtggt
aagattccgaacccgatccgtagctggaaggagtccggctttccgaaggaggtgctggag
atcatcgacaaggtcggctacaaggaaccgactccgattcagcggcaggccattccgatt
ggactgcagaatcgtgacattatcggtattgcggaaaccggttctggtaagactttggcc
ttccttatcccgctgctgaactggatccagggtcttccgaagattgaacggcaggaaacg
gcggaccaaggtccgtacgcgatcattctggctccaacacgtgagttggcccaacaaatc
gaagaagaaacgcagaaattcggtcaaccgctcggcatccgaaccgtcgtcgtcgtgggt
ggtttgtcccgtgaagagcaaggcttccgtctacggttgggttgtgaaatcgtcatcgcc
actccgggtcgtctgattgacgtgctcgagaatcgctacctggtcctgaatcagtgcacg
tacatcgtcatggacgaggccgatcgtatgattgacatgggcttcgaaccggacgtccaa
aagatcctcgagtacatgcccgtgacgaacctcaagccggacacggaagaagccgaggac
gccaccaaactgatggagaacttcaacacgaagaaaaagtaccgccaaacggtcatgttc
acggctacgatgcctcccgccgtcgaacgcctcgctcgaacgtatctccgacgcccggcc
accgtttacatcggttccgtcggcaaaccaaccgaacgaaccgaacaaatcgtccacatc
gtcaccgaaaacgaaaaacgcaagaagctcatggagatcctgtcccgcggcgtcgaaccc
ccgtgcatcatcttcgtcaaccagaagaagggcgccgacgtcctcgccaagggtctcgag
aagctcggctacaacgcgtgcacactccacggcggcaaaggtcaagaacagcgcgagtac
gccctggcttcgctcaagaacggctccaaagacatcctggtcgccaccgacgtcgccggt
cgtggtatcgacatcaaggacgtctcgctcgtcatcaactacgacatggccaaaacgatc
gaggattacacgcatcgtattggtcgtacgggacgtgccggcaagaccggttgcgccatc
tcgttctgcaccaaggacgacagccatctgttctacgacctcaagcagattattgtggcg
agtccggtgtcgtcgtgtccgcccgagctgatgaaccacccggacgcgcagcacaagccg
ggaacggtcgtgacgaagaagcgaagggaggagaagattttcgcttag
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