Campylobacter pinnipediorum: CPIN18020_0204
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Entry
CPIN18020_0204 CDS
T05033
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpin
Campylobacter pinnipediorum
Pathway
cpin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPIN18020_0204 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpin03021
]
CPIN18020_0204 (rpoA)
03400 DNA repair and recombination proteins [BR:
cpin03400
]
CPIN18020_0204 (rpoA)
Enzymes [BR:
cpin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPIN18020_0204 (rpoA)
Transcription machinery [BR:
cpin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPIN18020_0204 (rpoA)
DNA repair and recombination proteins [BR:
cpin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPIN18020_0204 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AQW85451
UniProt:
A0A1S6U5K8
LinkDB
All DBs
Position
199466..200482
Genome browser
AA seq
338 aa
AA seq
DB search
MRKITTSAYMPTEIKVESISENMAKIIAYPFEAGYAVTLAHPLRRLLYTSTVGFAPTGIK
IKGVTHEFDSMRGMLEDVALFIINLKNLRFKLKNDSQREVIEYNFKGHKEIIGADLNNDL
VEIVNPSEYLATLNEDAELSFQLIVQKGIGYVSSEDLRSSVDEDYIALDAFFTPVKKAIY
DIENVLVEDTPDFEKIIFTITTDGQVKPIEAFKNSLEAMYQQMSVFKGILNIDLDTPVVS
SNANSEYSKLLSSVEELNLSARSFNCIDKADIKYIGELALMDETELKDLKNLGKKSLDEI
KAIMEEIGYPVGATLPRDAKEYLKKKIAELKTQTNAKE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaattactacgtcagcttacatgccaactgaaataaaagttgaaagtattagc
gaaaatatggcaaaaataatcgcttatccttttgaggcaggttatgcggtgacattggca
catcctcttcgtcgtcttctttatacaagcacagttggttttgcgccaactggaattaaa
ataaaaggcgtaactcatgaatttgatagcatgagaggtatgcttgaagatgttgctttg
tttattattaatttgaagaacttacgtttcaagctaaaaaacgatagccaacgtgaagtt
attgaatataattttaagggacacaaagagattataggcgctgatttaaataatgattta
gttgaaattgtaaatccaagtgaataccttgctacattaaatgaagatgctgaattaagc
tttcagttgattgttcaaaaaggtataggttatgtttcaagtgaagatttaagaagcagt
gttgatgaggattatatagctcttgatgcattctttacgcctgtaaaaaaagcgatatat
gatatagaaaatgtattggttgaagatacaccagattttgaaaaaattatctttactatc
actacagatggtcaggttaaacctatagaagcatttaaaaatagtttggaagctatgtat
caacaaatgtcagtatttaaaggaatactcaacatagacttagatacacctgttgtaagt
tctaacgctaacagcgagtattcaaaattactatctagtgtagaagagttaaatttaagc
gcaagaagctttaattgtatagataaagcagatataaaatatataggcgaattagcttta
atggatgagacagagcttaaagatcttaaaaatctcggtaaaaaatccctagatgaaata
aaggctataatggaggaaataggttatcctgttggagctactcttccaagagatgctaaa
gaatatcttaagaaaaaaatagccgaattaaaaacacaaacaaacgcaaaggaataa
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