Chiloscyllium plagiosum (whitespotted bambooshark): 122542235
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Entry
122542235 CDS
T08871
Symbol
gga1
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122542235 (gga1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122542235 (gga1)
Membrane trafficking [BR:
cpla04131
]
Endosome - Golgi transport
Others
GGA
122542235 (gga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
BORG_CEP
PBD
Ferritin
DASH_Dad4
HEAT_Maestro
Cytochrom_C_2
PCRF
ECH_2
Motif
Other DBs
NCBI-GeneID:
122542235
NCBI-ProteinID:
XP_043535694
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All DBs
Position
39:complement(10847960..10967536)
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AA seq
1084 aa
AA seq
DB search
MSLGKLPVLKNLVSNSHSKRRFKSELTPDMISSPLGDFRHTMHVGRGGDVFGDTSFLSDH
GGEKARETAKSNPLVRALRNVRKSPMRSRNSSREMSPPPAVSPIIKNAVSLPHLLETKNG
SVERLNFKSVVSSPGVMDGSYGLESGFCTLPRWSRLDKPKESPAAAKSERRMDNLDAADF
ELPRNDSLLSFSLDLGPSLMAEVLGVMAKESPGSSAKAASPVRFDLGGSFGQAAPQGNDS
AHGKGERGLSVAARKGTYQQKGGADLHPEDLNGLGGPQDFTSERHVLRHCGGGGAIGYPD
SNDARGTRGGAGGSLRAGTRQLAPREAVGAREGSPPTDSGAPGRHFVAAPSTESWRYRAP
EEADSIDSSSSSSPGSWRKPSPSTGQRVPADGEERDKATNPLNRELEWNYIQEFCDQLNK
ELEGPQLATRFLAHKIQSPQEWEAIQALTVLETCMKNCGKRFHNEVGKFRFLNELIKVVS
PKYLGTRASEKVKAKVLELMFSWTVGLPDELKITEAYHMLKKQGIIKQDPVLPDDEPLPP
PPPRSNAMFEDEEKSKLLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEE
VNNNVKLLSEMLENYSKNETSESNEEIMKELYQRCEKMRPTLFRLASDTEDNDEALAEIL
QANDNLTQVINLYKKVVKGEEVNGVIDLPNIKASSSALLDLTGLDTGSNTPSYPAVPASQ
TWNPDLAQDLSSSVSLLDDELMSLGLNDLVPNAVPSSQSLESSNWNTFQSSESEELSGPV
TSAESSVLSSELLKPAASTAGQQTPAPACVPASSGSRALDDLDMLGKTLLQQSLPPGSQQ
VKWSAPQQRQTLRDLQNKSNTSTAVALGTSPLYPASSKSVSPVISTALSAGLALQSDQPA
AFTGSSNLATASAAPCIEQPGMQHDAQGGLKTSLMPQQEISLTNVLVPLESIKPSSILPV
TVYDKNSFRVLFHFAKDPPPGQPDVLVVVTSMISTAPQPVKNIRFQAAVPKVMKVKLQPP
SGTELPAFNPILQPSAITQVLLLANPQKEKVRLRYKLTFTLGEQTFNEMGDVDQFPPPES
WGKL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagggaagttgccggtcctcaagaacctggtctccaactctcatagcaagcgt
aggttcaagtccgagctgacccctgacatgattagctcgccattgggcgacttccgtcac
acaatgcacgtaggccgaggtggagatgtgtttggtgacacttccttcctcagtgaccat
ggaggggagaaggcgcgagagactgctaagtccaacccgctcgtccgagcactgaggaat
gtcaggaagtcaccgatgaggagccgcaatagtagccgagagatgtcgcctccaccagca
gtgtccccaatcattaagaatgctgtctccctgccacatctgttagagacaaagaatggg
tcagtggagcgactgaatttcaaaagcgtggtgtcaagtccaggagtgatggatggatca
tatggattggaatcgggattctgcacccttccgaggtggtccaggttggacaagccgaag
gagagccccgccgcagcaaaatcggagagacggatggacaacttggacgcggcggacttc
gagcttccccgcaatgactccttgctgtccttcagcctggacctggggccctccctgatg
gccgaggtgctgggggtcatggccaaggagagccccgggagctcggcaaaggccgcgtct
ccggtgagatttgacctgggaggttctttcggacaggcagcacctcagggaaacgacagc
gctcacgggaagggggagaggggcttgtcagtcgcggcacggaagggcacttaccagcag
aagggcggtgcggacctgcaccccgaggatctgaacggcttgggggggccgcaggacttt
acttcggagcgccatgttctccggcattgcggcggcggcggcgccatcggttatccggat
tcaaacgacgctcgtggcacgaggggcggcgccggcggcagcctgcgagcgggcacgcgg
cagctcgcgccgcgggaggcggttggcgctcgcgagggcagcccgccaacggacagcggc
gcccccggccgccattttgtcgccgcgccgtcgacggaatcgtggcggtaccgggccccc
gaggaggcggacagcattgacagcagcagcagtagcagcccgggcagctggaggaagccg
tcgccgtcgaccgggcaacgtgtgccagcggacggcgaggagagagataaagccacaaat
cctttaaatcgagaactggaatggaactacattcaagaattttgtgaccagctgaacaag
gaattggaaggacctcagcttgccacaagatttctggcacataagatccaatctccccag
gaatgggaagctattcaggccttgacagtcctggagacatgtatgaaaaactgtggcaag
cggtttcataatgaagtaggaaaattcaggtttttaaatgaattaatcaaagtggtgtca
cccaagtatcttggaacgcgagcttctgagaaagtaaaagctaaagttttagaactaatg
ttcagctggacagtgggtctaccagatgagctgaagatcacagaggcctatcacatgctt
aaaaaacaaggaattataaaacaggatcctgtattacctgatgatgaaccccttccgcca
ccccctccacgctcaaatgccatgtttgaagatgaggaaaagtctaagctactggccaga
cttctgaagagcagccacccagaggacctccgagctgcaaataaattaatcaaggagatg
gttcaagaggaccagaaaagaatggagaagatttctaaaagagtgaatgcaattgaagag
gtgaacaacaatgttaaacttctgagtgaaatgctggagaattacagcaagaacgaaact
tctgagagtaatgaagaaataatgaaggaattgtaccaacgatgcgaaaagatgaggccc
acactattcagactggccagtgacactgaggacaatgatgaggcactggctgaaatcctt
caagcaaatgacaacttaactcaggtcattaacttgtataagaaggttgtgaaaggagaa
gaagttaatggggtgattgatctgccaaacattaaagccagcagttcagctctactagac
ctgacggggttggacactggctcaaatactccttcctatcctgctgtccctgccagtcag
acctggaatcctgatctggcacaggatctaagcagctctgtatcattactagacgatgaa
ttaatgtcattagggctgaatgatctagttcctaatgccgtaccttcatcacagtctctt
gaatcaagtaactggaatacatttcagtcctctgagtctgaagagctgagtggccccgta
acctcagcagaatccagcgtattgtcctctgaattgttgaagccagcagcttcgacagct
ggccagcaaactcctgcccctgcctgcgtgcctgcatcctctgggagcagagccttggat
gacttggatatgttggggaaaaccctccttcagcagtcgttgcctccaggatctcaacag
gtcaaatggtcagctccacagcaaagacaaactcttcgagatctccaaaataaatcgaac
actagcactgcagttgccttgggcacatcgccactttatcctgcttcaagcaagagcgtc
tcgccagttataagcacagctctttccgcaggccttgcccttcaatctgatcagcctgca
gcatttacaggcagctctaacttagccacagcttcagctgcaccatgtatagagcagcct
gggatgcagcacgatgcacaaggaggcctcaaaacctcacttatgcctcagcaggaaatt
tccctcactaatgttttagtacctctagaatcaattaaaccaagtagcatcttgccagtt
actgtatatgataagaatagttttcgagttctgtttcattttgcgaaggatcctccacca
gggcagccagatgttttggttgttgtcacttccatgatcagtacggcaccacaaccagtg
aaaaatataagattccaagctgctgttcctaaggtcatgaaggtcaagctgcagcctccc
tctggcaccgagctaccagcatttaatccaatacttcagccttctgcaattacacaggtc
ttactgctagcaaacccacagaaggagaaagtccggttacgatacaagctcacatttacg
ttgggcgagcaaaccttcaatgagatgggagacgtagaccaattcccacctccagagtcg
tggggaaagctctaa
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