Chiloscyllium plagiosum (whitespotted bambooshark): 122548208
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Entry
122548208 CDS
T08871
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122548208
04082 Neuroactive ligand signaling
122548208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122548208
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122548208
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122548208
NCBI-ProteinID:
XP_043542691
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Position
3:96649100..96707136
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AA seq
487 aa
AA seq
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MFKPEVIRTARFNRTVAGIISILQVMPYFLKTFLILFCLTIAAESRKHRKRRWASQVEPR
KQGSPILRRIPDTTKTRTTNSEHLLRVGDHDFTMRPAFGGPAIPVGVDVMVESLDSISEV
NMDFTMTLYLRNYWKDERLSFPSTTNKSMTFDGRLVKKIWAPDVFFVHSKQSFIHDTTTD
NIMLRIFPDGNVLYSIRVTVTAMCNMDFSCFPLDTQTCSLEIESYAYTEDDLMLYWKGDK
DALKTDEKVSLSQFLIQRFHTTSKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATL
MVMLSWVSFWIDRLAVPARVSLGITTVLTMSTIITGVNASMPKVSYIKAVDIYLWVSFVF
VFLSVLEYAAVNYLTTVQERKERKFQEKFPCTCGITSTKDLMFDGTFSEADANSLAGYTR
TSIITDDRVKQVHLSIGAESNLQKKSRLREFVGMRIMKNTHIIDKYCRMIFPASYILFNL
VYWSVYL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaccagaagtgattcgcaccgcacgttttaacaggactgttgctgggattatc
tcgattttacaagtcatgccgtattttttaaaaactttcctgatcctcttctgcctgacg
atagctgctgaaagcaggaaacacaggaagagaagatgggcatctcaggtagaaccacgg
aaacagggcagccctatattaaggagaattccagatacaaccaaaactcgaacaacaaac
tctgaacatcttctcagagtgggtgatcatgatttcacaatgagacctgcatttggtggc
cctgcaatacctgttggagttgatgtgatggtggaaagcctggacagtatttctgaggtg
aatatggatttcacaatgactctgtatttgcgcaattactggaaagatgagcgactttca
tttcccagtaccacaaacaaaagtatgacatttgatggaaggcttgtcaaaaagatttgg
gcaccagatgtgttttttgttcactcaaagcaatcgtttatccatgacacaaccacagat
aatataatgttacgcatctttcctgacggaaatgtgctatatagtataagggttacagta
acagctatgtgcaacatggatttcagctgctttcctcttgacacacagacctgttccctg
gagatagagagctatgcttacactgaagatgaccttatgctgtattggaagggtgataaa
gatgcattgaagacagatgagaaagtctctttgtctcagttccttatccagagatttcac
actacatccaaattggctttctacagtagtacaggttggtacaatcgtttgtacattaac
ttcactttgcgccgccacattttcttctttttgctacaaacctactttccagcgactctg
atggtgatgttgtcctgggtatcattctggattgatcgcctagctgtaccagctagagtt
tcattaggtataacaacagttctaacgatgtccactattatcacgggtgtgaatgcttca
atgccaaaggtgtcgtatattaaagctgtggacatttacctgtgggttagttttgtgttt
gtctttctctcagtgctggagtatgcagctgtgaattacctaaccacagtacaagagagg
aaagaaagaaaattccaggaaaagtttccctgcacatgtgggattaccagcaccaaggac
ttaatgtttgatggtacctttagtgaagcagatgccaacagtctggcaggatataccaga
acgtcgatcattactgatgacagggtcaagcaggttcacctgtccattggtgcagaatcc
aatttacaaaaaaaaagtcgccttcgggagtttgttggcatgcggatcatgaagaatacc
cacataatagataaatactgcagaatgatatttccagcatcttatatattatttaactta
gtatattggtctgtatacttataa
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