Chiloscyllium plagiosum (whitespotted bambooshark): 122548225
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Entry
122548225 CDS
T08871
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122548225
04082 Neuroactive ligand signaling
122548225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122548225
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122548225
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
122548225
NCBI-ProteinID:
XP_043542705
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Position
3:96726310..96772538
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AA seq
476 aa
AA seq
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MWFSHLLPFYCCFWLVESNSERQRRKDQMHEYHQSSRSQRFGRDVEETKKQGSPILKRSA
DATKSYLTKSEQLLRVDDHDFTMRPGFGGPSIPVGVDVQVESLDSISEVDMDFTMTLYLR
HYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNIMLRVYPDGK
VLYSLRVTVTSMCYMDFSRFPLDTQSCSLEIESYAYTDDDLMLYWKSGNNSLTTDEKISL
SQFMIQEFRTTTKLAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAV
NYLTTVQERKERKLREKLPCTCAIPQPRPLMVERTYSDGEVSNLAEFAGPDYMPQNGEKQ
DRELVKPPIADEPTENKEKILSRYIWIDTHIIDKYSRLIFPVAYALFNMIYWSIYT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttagtcatctcttgcccttttattgctgtttttggttggtagaaagcaattca
gaaaggcagaggagaaaagatcaaatgcatgaatatcatcagagcagcagatcccagaga
tttgggagagatgttgaagaaacaaaaaagcagggcagtcctattctgaagagaagtgca
gatgcaacaaaatcttatttaacaaaatctgagcaacttctcagagtggatgatcatgat
ttcacaatgagacctggattcggaggtccttcaatacccgtgggtgtcgatgtacaggta
gaaagtctggacagcatctcagaagtggatatggactttacaatgacactatacctgagg
cattattggaaagatgagcgcctttcattcccaagcactaacaacctgagtatgaccttt
gatgggaggctggtcaaaaagatctgggttcctgatatgttctttgtacattcaaagcga
tcctttatacatgatacaaccacagacaacatcatgttgcgtgtctatcctgatggaaag
gtattgtacagtttgagggttacagtaacatcaatgtgttacatggatttcagtcgtttt
cctcttgacacccagagctgctcgctggaaattgagagctatgcttacactgatgatgac
ctcatgctgtactggaagagtggtaataactcattaacgacagatgaaaagatttctcta
tctcagttcatgatacaagaatttcgcacaaccacaaagctggccttttatagtagtaca
ggttggtacaatcgcctgtacatcaattttacactgcatcgccacattttcttctttttg
ctgcagacctattttccagcgactctgatggtcatgttgtcctgggtatcattctggatt
gatcgccgagcggtccctgctcgtgttccattgggtataacgacagttctaacaatgtcc
actattatcacgggtgtgaatgcttcaatgccaagggtttcgtatattaaagctgtggac
atttacctgtgggttagttttgtgtttgtctttctctcagtgctggagtatgcagctgtg
aattacctaaccacagtacaagagaggaaagaaagaaagcttcgggaaaagctaccttgc
acctgtgcaataccacagccaagaccattaatggtagaacgcacatatagtgatggagaa
gtcagcaacctggctgaatttgctggacctgattatatgccacaaaatggagaaaaacag
gacagagagctggtcaagccgccaattgctgatgagccaactgaaaacaaggaaaaaatc
ttaagcagatacatttggattgacacacacattattgataaatactccaggctgatattt
ccagttgcttacgctctttttaatatgatatattggtctatttacacatag
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