Chiloscyllium plagiosum (whitespotted bambooshark): 122558500
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Entry
122558500 CDS
T08871
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122558500 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122558500 (nup93)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122558500 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
122558500
NCBI-ProteinID:
XP_043563098
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All DBs
Position
17:complement(55895329..56015955)
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AA seq
820 aa
AA seq
DB search
MDMEGFGELLQQAEQLAAETEGVSELPHVERNLQEIQQAGEVLRSRTLTRTSQETADVKA
SILLSSKGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRKR
TFAMAEKYHWESMLVEWEHEKQKILHTLLTSGEDALDFTQEAEPSFVSEMGPPGRSAMDS
VEVAYARQIYIYNEKVVNGHLQPNLGDLCSTVAESLDDKNVSELWAMVKQMTDVLLVPAA
DALKSRTSLEMQMAFVRQALNFLEQSYKNYVMATVYGNLHQAQLGGVPGTYQLVRSFLNI
KLPAPLQGLQDGEVEGQPVWALIYYCLRCGDLMAALQVVNRAQHQLGEFSNWFQEYVQSD
DRRLPPTTENKLRLHYRRALRNSTDPYKRAVYCLIGRCDVTDNHSEIADKTDDYLWLKLN
QVCFDDDSSSSPQDRQTLPQLQSQLLEEYGETHFAANRHPFLYFQVLFLTAQFEAAIAFL
FRMERLRCHAVQVALVLYELKLLLKSSAQSAQLLSQDAADPRPIRRLNFIRLLMLYTRKF
EPTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAVISKVASVAENKGLFEEAVKLYDLAQNPDKVLELMNKLLSPVIPQISAPQSN
KERLKNMALLVAERYRNRGVAAEKSVDSTFYLLLDLITFFDEYHSGNIDRAIDVMERLKL
VPLSQECVEERVAAFRNFSDEIRHNLSEVLLATMNILYTQYKRLKGKSPATPTRPQRAME
DRDSQLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaaggtttcggcgagctgttacagcaagctgagcagcttgcagcagaaact
gaaggtgtgtctgagcttccccatgtagaaagaaacctacaggagattcagcaggctgga
gaggtcttgcgctcaaggaccctgacacgcacatcacaggagacagcagatgtcaaagcg
tccattctgctaagttctaaaggattagacatctctcacatttctcaacgcttggaaagt
ctcagtgcagctacaacatttgagcctcttgaaccagtgaaggacacagatatacagggt
tttctgaagaatgagcgtgataatgcactgctgtcagccattgaagagtccaggaagagg
acgtttgcaatggcagagaagtatcactgggagtccatgctggtggaatgggaacatgag
aaacagaagatcctccatacacttctgacatcaggggaggatgctcttgacttcactcag
gaagcagagccaagttttgtcagtgaaatgggaccaccaggacggagtgcaatggacagt
gtggaagtggcatatgcacggcagatctatatatataatgagaaagtggtgaatggacat
ctacaaccaaacttaggagacctttgcagcactgtagctgaatctttggatgacaagaat
gtttctgaactgtgggcgatggtgaagcaaatgactgatgtgctgttggtacctgctgct
gatgcactgaagagccggaccagtttggaaatgcaaatggcgtttgtacggcaggcccta
aattttctggagcagagctacaagaattatgtaatggcaactgtctatggaaacctgcac
caggctcaattaggtggtgtacccggaacttaccaactagtccgtagctttcttaatatt
aaactgccagctcccttgcaagggcttcaggatggtgaggttgaaggccagccagtctgg
gccctcatttactactgtttacgttgtggagacttaatggcagcactgcaggtggtgaac
cgtgcacagcatcagctgggggagtttagcaactggttccaagagtacgttcagagtgat
gaccggagattgcctcccacaacagagaataaacttcggctacattaccgacgtgctttg
cggaacagcacagatccatataaaagagcagtttattgtctgattggtcgatgtgatgtt
actgacaaccacagtgaaatagctgataaaacagacgactatctctggttaaagcttaat
caagtatgttttgacgatgatagtagcagctctccgcaggacaggcaaaccctaccacaa
ttgcagagtcagctgctggaagaatatggtgaaacccactttgcagccaaccggcatcct
ttcctgtacttccaagtccttttccttacagcccaatttgaggcagctattgcctttctc
ttccgtatggaaagactgcgttgtcatgcagtgcaagtggccctggttctttatgagtta
aaactacttctgaaatcctctgctcagagtgcacagctgttgagtcaggacgctgctgat
ccccgtccaatacgacgccttaatttcatccgtctgctaatgctgtacaccagaaaattt
gaacccactgatcctagagaagcactccaatatttctatttcctcaggaatgagaaagac
agtcaaggagaaaacatgttcatgagatgtgtcagtgagcttgtcattgaaagtcgagag
tttgacatgctgcttgggcgattagaaaaggatggcagtcgaaagcctggtgtaattgac
aagtttgctggtgacacaagagctgtcatcagtaaagtagcttcagtggctgaaaataaa
ggcctattcgaggaggctgtgaagctttacgacttggctcagaatccagacaaggtcctg
gagctaatgaacaaactgttgagccctgtgataccacaaatcagcgcaccccagtctaat
aaagaacgattgaaaaacatggcacttttagtagctgagaggtatcggaatcggggtgtt
gctgcagaaaagtcagttgacagcactttctatctccttctggacctaattacctttttt
gatgagtaccattctggcaatattgacagagcaatcgatgtcatggagagactgaaactt
gtgcctctcagtcaagaatgtgttgaggagagagtggcagctttcagaaatttcagtgat
gagattcgacacaacttgtcagaagtgctgcttgccaccatgaatattctgtatacccag
tacaagagattgaagggcaaaagcccagccaccccaaccagacctcagcgtgcaatggag
gatagagactcgcaactccgaagccaggcacgtgccctgataacatttgctggaatgata
ccatatagaatggctggtgatacaaatgcacgcctagtacagatggaagtcctcatgaac
tga
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