Chiloscyllium plagiosum (whitespotted bambooshark): 122558548
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Entry
122558548 CDS
T08871
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122558548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122558548
Ion channels [BR:
cpla04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122558548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
122558548
NCBI-ProteinID:
XP_043563191
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Position
17:60272600..60474129
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AA seq
1393 aa
AA seq
DB search
MFTWIAKVAPQPPQPVKHLEITPEVKSTSQPAEELQEEKTENFTENTEQASLPKNETDIP
SNPGETQAEPDQVSVPSAETSAGGGVLVWIAQNISRLIPQHLGSPTLPKAAPAESEKEIE
TKEEEPSTVPAPTLAPDPSPAPAPAPTPAPTPAPDPAPSPSPVLDPALVPESVPAPDDQP
LNQATPIAENPSIQDQRDGGRSGGMFRWFVQGLEKVLPQPEGKSRPTNLSVMAAEVSTAP
QEETAKAQTEQCTAETMPEPVVKPEPEPEPEPEPEPELKVEVAVVPETPKEATVQQAELP
TDTGSIVSVFEMPQSSANGSSMFGWVTQSLGKVIPQPVGSSVPVTAKVKMEPAPQEYEVP
VEEKEPQLNVTNVNEEVPKAVTIIEVVPADPTPEPIVKDENQPAGEPVTKTSNEEAKSVF
SWLAKGLGNVVPQPVIKSQLTKEDDRTITACHAEEIPVCIPKEMELEDIESDWDEEVQYL
DAETQTSECEALAQVKTQTTATDVTVVKQSDEIPEEDEERQLWSITEEQEIDAEIVKVCE
GTESSDDLPSEEAETVCEGTKSSEDQSPTDLVQICEEAKTDDNLPAAVNLTAICSEESDQ
TVPPKLDEEASEDQVLATVENSPFQQEEEILKSELDQGDPHTTSWPSVNIEDVDSEGVTL
TSENGQLPPTKVPSSPYKSRTLTVPGVPMSAQRSKSSYHEKVDEPSEELPVQAWNSQTNL
QVDDSFRDKQGSTSSITSAIVNERLQELVRSFKERTELVKEKLIDPDASEDEASPTASPT
KKAVEAPAPPPPPEEEKEEEEEHYCEMMCCRFKTQPWIRRIRGLGFPSSVDPFSNPMYVL
WLSIVVFAWNWNVWLIPVRCTFPYQTPDNVHLWLLMDYFCDLIYVIDMAFFQSRLQFVQG
GDIITAIKPMRENYMKTPKFKMDLVSLLPLDILYIKLGFRPVLRFPRLMKYMTFLEFNDR
LEAIMSKAYIYRVIRTTIYLLYSLHINACLYYWASDYEGIGATKWVYDGEGNSYMRCYYW
AVKTLITIGGLPDPQTVFEILFQLVNYFTGVFIFSIMIGQMRDVVGAATAGQTYFRNCMD
NTVRYMNSYRIPRFVQNRVRKWYEFTWESQGMLDETELLVQLPDKMRLDIAIDVNYSIVS
KVALFQGCDRQMIYDMLKRLKSVVYLPGDYVCKKGEIGREMYIIKAGEVQVVGGPDGKTV
FVTLRAGSVFGEISLLSVGGGNRRTANVVAHGFANLFILDKKDLNDILTHYPDSQKLLRK
KAKKLLSKDDGKDVKPQPKGIQHIIPPRPETPKLFLAALSITDKFGIKGTFSLIKQKLRE
SAKMKPHPMPPASPVHRRSPVPVEKVEDDYDDEVVSESSDYSVLIRMSPSHHKDKEQILS
VEVPAEEEEDSEK
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgtttacctggatagcaaaagttgccccacaaccacctcagccagtcaagcatctggag
atcacacctgaagttaagagtacctctcaacctgcagaggaactacaagaagagaaaaca
gagaactttacagaaaatacagaacaagcctccttacctaaaaatgaaacagatatccct
tctaacccaggagaaacacaggctgaacctgaccaggtgtcagtacctagcgcagaaaca
agtgctggaggtggggtcctagtctggattgcacagaatataagcagactcattccacaa
catcttggtagccccacactgccaaaagctgcaccagctgaatctgaaaaggaaatagag
actaaggaagaagaaccaagcacagttccagctccaacattagctccagatccatcacca
gctccagctccagctccaacaccagctccaacaccagctccagatccggctccatctcca
tctccagttctagatccagctctggttccggaaagtgttccagctccagatgaccaacca
ctaaatcaggcaactcctattgcagaaaacccatcaatccaggaccaacgggatggaggt
cgaagcggtggaatgttcaggtggtttgtacaagggctggaaaaagtgttaccacaacca
gaaggaaaatctagaccaaccaatctcagtgtgatggcagctgaggtgtccactgctccc
caggaggaaactgcaaaagcacagacagaacaatgcactgctgaaacaatgcctgagcct
gtggttaaacctgaacctgaacctgaacctgaacctgagcctgagcctgagctgaaagta
gaagttgctgtggtacctgagactcctaaagaggctactgtccagcaggcagaactccct
acagatactggttccattgtcagtgtctttgaaatgcctcagtcatcagctaatggcagc
agtatgtttggttgggtgacacaaagcctgggaaaggtgatccctcagcctgtagggagc
tctgtgcctgtaactgccaaagtgaaaatggagccagcaccccaagagtatgaggtccca
gtggaggagaaggaaccacaactgaatgtgactaatgttaatgaggaagtgcccaaagct
gtcaccattatagaagttgttccagctgatccaaccccagaaccgatagtgaaggatgag
aatcagccagcaggagagccagtcactaaaacaagcaatgaggaagctaaaagtgtcttc
agttggctagcaaaaggtcttgggaatgttgtgccacagccagtcatcaaatcccaatta
acaaaggaggatgacaggactataactgcatgccatgcagaggaaattccagtttgtatt
ccaaaggagatggagttggaagatattgaatctgactgggatgaagaggttcaatacctt
gatgctgaaactcaaacaagcgagtgtgaggcattggcacaggtcaaaacacaaaccaca
gccacagatgtaacagtggtgaagcagagtgatgagattccagaggaagatgaagaaagg
cagttgtggagtatcactgaggagcaggagatagatgcagaaattgtgaaagtgtgtgaa
ggaactgagagcagtgatgatctacccagtgaagaggcagagacggtatgcgaagggacc
aagagcagtgaggatcaatcaccaacagatttggtgcagatttgtgaagaagccaagact
gatgataatctaccagcagcagttaacctgactgccatctgctcagaggagagtgaccag
actgtgccaccaaagcttgatgaagaagcctctgaagatcaagtgctggcaacagttgag
aacagcccctttcaacaggaagaggagattttgaagagtgagttggatcaaggagatcct
cacacaacatcgtggccctcagtcaacattgaagatgtagattctgaaggtgttacttta
acatctgagaatggccagttgccaccaactaaagtgccctcttcaccatacaagagtcgg
acacttacagtgccaggtgtccccatgtcagcacaaagaagtaagtcctcctatcatgaa
aaggtggatgaaccatccgaggagttaccagtgcaagcttggaatagccagaccaacctc
caggttgatgatagtttcagagataaacagggctcaacatcaagtattactagtgctatt
gtgaatgagcgcctccaagaactggtgagaagctttaaagaacgaacagaactggtcaag
gaaaagcttattgaccccgatgcatctgaagatgaagcaagtccaactgcatcaccaacc
aagaaggctgtggaagcccctgctccacctcctcccccagaggaagaaaaggaagaggaa
gaagaacactactgtgaaatgatgtgctgccggtttaaaactcaaccttggatcagacgg
attagaggactggggtttccatccagcgttgatcccttcagcaatccaatgtatgtgctg
tggttatccattgtggtcttcgcctggaattggaatgtctggttaatccctgtgcgttgt
acttttccttatcaaacacctgacaatgttcacctgtggctgttgatggattatttctgt
gatctgatttacgtgatagatatggcttttttccagtctcgtcttcagttcgttcaagga
ggggacattataacagcaataaagcctatgagagaaaattacatgaaaacacctaaattc
aagatggacttagtgtcgcttttgcctctggacattttgtacattaagttaggtttcaga
cctgtattaaggttcccacgcctcatgaagtacatgacctttctagaattcaatgaccgg
ctggaggctataatgagcaaggcctatatatatagagttataaggaccacaatatatctg
ttgtacagcctccatataaatgcctgtctatattactgggcatctgactatgagggaatt
ggagccacaaagtgggtctatgatggtgaggggaacagttacatgaggtgctactactgg
gctgtgaagactctgattacaattggagggctaccggacccgcagacagtatttgaaatc
ctctttcaacttgtcaattatttcacaggagtctttatcttctccattatgattggtcag
atgagagatgtggtgggcgcagccactgctggacagacctattttcgaaactgcatggat
aacactgtgagatatatgaactcttacagaattcctcgattcgttcagaacagagtgcgc
aagtggtatgaattcacttgggaatcacaaggaatgctggatgagacagagctgttggtg
caacttcctgacaagatgagactggacattgccattgatgttaactatagcatcgtcagt
aaagtggcactgtttcagggctgtgacagacagatgatttatgacatgctgaaacgactg
aagtcagtggtgtacctgcctggagactacgtgtgcaagaagggagagattgggagagaa
atgtacatcattaaagctggagaggtccaggttgttggtggccctgatggaaagactgtg
tttgtgactctacgagcaggttctgtatttggcgagatcagtttactttcggttggagga
gggaatcgacggactgcaaacgtcgttgctcatggatttgcaaacctcttcattcttgac
aagaaagacttgaatgacattctaacccactatccagattctcagaaactgctgcgaaag
aaagctaagaaactcctctctaaagatgatggaaaagatgtaaagccacaaccaaaagga
atacagcatatcatccctccaagaccagagactcccaaattattcttggcagccctctca
ataaccgacaaatttggaatcaagggaacattctcgcttattaaacagaaactcagggaa
tctgccaaaatgaagcctcatccgatgcctcctgcctcccctgtccatcgccgatcacct
gttccagtagaaaaggtggaggatgattatgatgatgaagttgtttctgaatcttcggat
tactctgtgctgatcagaatgagcccctcacaccacaaggataaggaacaaatcttatct
gtagaagttccagctgaagaagaagaggattctgaaaaatga
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