Chiloscyllium plagiosum (whitespotted bambooshark): 122558949
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Entry
122558949 CDS
T08871
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3 isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122558949 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122558949 (slc6a11b)
Transporters [BR:
cpla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122558949 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122558949
NCBI-ProteinID:
XP_043563859
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Position
18:22357733..22535152
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AA seq
622 aa
AA seq
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MTAEKAIPIINGKPDDAMDTEASNVNLVRTNDKKVSERGQWNNKIEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVIFFIGCGIPVFFLETALGQYTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVFYIIVLAWAIFYLFNSFTTELPWATCGHTWNTENCVEFQKLNSTNCS
HTAVPNATSPVIEFWEHRVLGLSSGIDHIGSIRWELALCLLAAWIICYFCIWKGPKSTGK
VVYVTATFPYLMLLVLLIRGVTLPGAGEGIKFYLYPDISRLSDPQVWLDAGTQIFFSYAI
CLGCLTALGSYNPYHNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAFEQGVPIAEVAE
SGPGLTFIAYPKAVTMMPLAPLWAVLFFLMLIFLGLDSQFVCMESLVTAIIDMYPKIFRV
GYRREQLICIITIASYLIGLIMVTEGGMYIFQLFDAYASSGMCLLFVAIFECICIGWAYG
SNRFYDNIEDMIGYRPFILIKWCWNFITPGICSAIFIFFIVRYKPLKYNNTYVYPGWGYA
LGWALALSSMVCIPLGFIFKIWNTEGTFLQRIKKLTTPSLDLRRKGVGSLNMETCCSTIN
DCDSKLKGDGRIPAITEKETHF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggagaaagcgattccaataatcaatgggaagccagacgatgcgatggacacc
gaagcatcgaatgtcaatttagttcgcaccaacgacaagaaagtgtcagaaagaggccaa
tggaataacaaaatcgaatttgtcttgtctgtggccggggagatcattggattaggaaac
gtgtggcgattcccttacctctgttacaagaacggaggcggggccttccttattccatat
gtgatttttttcatcggctgtggcataccggtgtttttcctggagactgcactgggtcag
tacaccagcgagggaggcataacgtgctggaggaaagtttgtccgctttttgaaggtatc
ggatatgctactcaggtcattgaggcacatttgaatgtgttttacatcattgttttggcg
tgggccatattttacctgttcaactcctttacaactgaacttccttgggctacctgtgga
catacctggaacacagaaaactgtgtagagtttcagaagctgaattccaccaattgcagt
catacagctgtaccaaatgcaacttcacctgtcattgagttctgggagcatagagtgctc
ggattatcaagtggaattgaccacatcggaagcatacgatgggaactggctctttgtctt
cttgctgcttggattatctgttatttctgcatttggaagggaccaaagtccactggaaag
gtggtgtatgtaacagcaacattcccctacctgatgctgttggttttactgattcgagga
gtgactctacctggagctggagagggaataaagttttatctttacccagacatatcacgt
ctgtcagatcctcaggtctggctggatgccggtactcagattttcttctcatatgcaatt
tgccttggatgcttgactgcattaggaagctataacccctatcacaacaactgctacagg
gattgtataatgctatgctgcctcaacagtggcaccagctttgttgctggcttcgctatt
ttctctgtgttaggattcatggctttcgaacaaggcgtaccgatagcagaagtagctgaa
tcaggtcctgggctgacgttcattgcttatccgaaggctgtcacgatgatgcctcttgca
ccactatgggctgttcttttcttcttgatgctcattttccttggactggacagtcagttt
gtgtgtatggaaagtctggtaacagctataatagacatgtatcccaagatattccgtgtc
ggatacagaagagaacagctgatttgcattatcacaattgcgtcatacttgattggatta
ataatggtaacagagggaggaatgtacatttttcagctcttcgatgcatatgcttcgagt
ggcatgtgtcttctctttgtggccattttcgagtgcatttgtataggctgggcctatgga
agtaacagattctatgacaatattgaagacatgattgggtacaggccattcattttaatt
aaatggtgctggaatttcatcactcctggtatatgttcagcgattttcattttcttcatt
gtgagatataaaccacttaaatataacaacacatacgtctatcccggctggggttatgct
ttaggatgggccctagctctttcttccatggtttgtatacctctaggatttatcttcaaa
atttggaacactgaaggaacttttctacagagaattaagaagcttacaactcccagtctg
gacttacgacgaaaaggagtaggatcactcaatatggagacatgctgcagcacaattaat
gactgtgacagtaaactgaaaggtgatgggcgtattcctgccatcacagagaaggagacg
cacttctga
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