Chiloscyllium plagiosum (whitespotted bambooshark): 122559330
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Entry
122559330 CDS
T08871
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122559330 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpla03310
]
122559330 (nr1h4)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122559330 (nr1h4)
Nuclear receptors [BR:
cpla03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
122559330 (nr1h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122559330
NCBI-ProteinID:
XP_043564654
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Position
19:complement(63168077..63285517)
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AA seq
476 aa
AA seq
DB search
MKQWVMSEANMLGHSQFSPSEGFCLTDSSFFDVMADQPSLSLQVPDASAYAQYSSTSLPS
MQLCSIANPYYPSNNYYTQYSDAWYSSAMYDAKKLSCDTIFHEDMDECDITVTKKSRLGS
LSGKLKGDELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMR
RRCQECRLRKCKEVGMLAECLLTEIQCKSKRLRKAPTLPSVEPSQETADGVDSKLVTSTT
RHNKHKIEFTQKQQDLLRHILDAFSKYRIPQEVTKKLLQQRSSTEENFLLLTETATSHVQ
VLVEFTKKLPGFQMLDHEDQIALLKGSAVEAMFLQSAQIFSRKIPSQQSELLEDRIRHSG
IAEEYITPMFNFYRSIGELKMTQEEFSLLTAITILSPDRSFVKNREAIDRLQEPLLEILQ
KYCKLNHPQDPQHFARLLGRLTELRTFNHHHSDMLMSWKINDQKFTPLLCEIWDVQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtgggtcatgtctgaggccaatatgttgggacacagtcaattttcaccatcg
gagggattttgtctcactgactcctcattctttgatgtgatggcagaccaacccagtcta
tctctgcaagttccagatgcatctgcctacgctcaatattcaagcacatctctaccatcg
atgcagctgtgctccattgccaatccttattaccccagcaacaactactacacccagtac
tctgacgcctggtactcctcagccatgtacgatgctaagaaactttcctgtgacaccatt
tttcatgaagacatggatgagtgtgacatcacggttaccaagaaatccaggctgggctct
ctgtctgggaagctgaaaggtgatgagctgtgtgttgtgtgtggtgacaaggcttcggga
tatcattacaatgcactcacctgtgagggctgcaaaggattcttccgccgcagcatcact
aagaacgcggtgtacaaatgtaagaatggagggaactgtgagatggatatgtacatgagg
cggaggtgtcaggagtgtcgcctgaggaaatgcaaggaagtcggaatgctggccgaatgt
ctattaactgaaattcagtgcaaatcaaagcgactgaggaaagccccaacactgccttca
gtggagcccagccaagagactgctgatggagtcgattccaaactagtgacctccacaaca
agacacaacaaacacaaaatagagttcacccagaagcaacaagatctactgaggcatatc
cttgatgctttttccaagtatcgaatccctcaggaagtcaccaagaagctactacaacag
agaagcagcactgaggagaacttcctcctgctcactgaaacagccaccagccatgtacag
gtgcttgttgaattcacaaagaagttgcccgggttccagatgttggaccatgaggatcag
atagccctgctgaaaggctctgctgttgaggccatgttccttcagtctgctcagatattc
agcaggaagattccttcgcagcagagtgagttgctggaagatcgaatccgtcacagtggt
atagccgaggagtacatcacccccatgtttaacttctatcgaagtataggggagttgaag
atgacacaagaggaatttagtctattaacagccatcaccattctgtcaccagatcgttct
ttcgtgaagaatcgggaagccatcgacagacttcaggagccattgttagagatcctgcag
aaatactgcaagctgaaccacccgcaggacccccagcattttgcccggttgctggggaga
ctcactgagctcaggacctttaaccaccatcactcggatatgctgatgtcctggaagatc
aatgatcagaagttcacgcctcttctctgtgagatctgggacgtgcagtga
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