Chiloscyllium plagiosum (whitespotted bambooshark): 122562815
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Entry
122562815 CDS
T08871
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122562815 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122562815 (ufd1l)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122562815 (ufd1l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
NRIP1_repr_2
Motif
Other DBs
NCBI-GeneID:
122562815
NCBI-ProteinID:
XP_043571995
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Position
25:44841633..44874695
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AA seq
307 aa
AA seq
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MFAFNMFDQAIPHAFRNRFSTQYRCYSVSMFAGSDRSDVEKGGKIIMPPSALDQLSRLNI
TYPMLFKLTNRKTDRMTHCGVLEFVAEEGICYLPHWMMQNLLLEEGGLVQVESVNLMVAT
YSKFQPQAPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS
IIECDMNVDFDAPLGYKEPERHYQPEDSSDIESDHTAFVPIDLGFRAFTGAGNRLDGKKK
GVDPSPAQINPEDIKRGIPNYEFKIGKITFIRNSRPQPKRIEEDSGTSRFIAFSGEGQSL
RKKGRKP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccttcaatatgtttgaccaggcaattccacatgcctttcggaatcgtttctca
acacaataccgatgctactcagtctcaatgttcgcgggcagtgatcggtcagatgtagag
aaaggaggcaaaataataatgccaccatctgctctggatcaactgagtcgtctgaatatt
acatacccaatgcttttcaaacttacaaacagaaaaactgaccgaatgacacactgtggt
gtcctggaatttgtggcagaagaaggtatctgttacctgcctcactggatgatgcagaac
ctgctgctggaggaagggggcctcgttcaggtagagagtgtgaaccttatggttgccact
tactccaaatttcagccacaagctccggacttcttggatatcacaaacccaaaagctgta
ttggaaaatgccttgaggaactttgcctgcttaactacaggtgatgtcattgctatcaac
tataatgagaagatctatgagcttcgagtcatggaaacaaaaccagataaagctgtttcc
atcatcgagtgtgatatgaatgtagattttgatgctccgttggggtataaagagcccgag
agacattatcagcctgaagactcctcggatatagagtctgaccacactgcctttgttcca
attgatttaggtttcagggcattcactggtgctgggaatcggctagatgggaagaagaaa
ggagttgatcccagtccagcacaaatcaacccagaagatattaaaagaggaatcccaaac
tacgaattcaaaataggaaaaatcacctttatcaggaactcccgaccacagcctaagcga
atagaggaggattctgggaccagcaggtttatcgcattctctggagaaggacagtcttta
cgcaagaaaggaaggaagccctag
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