Chiloscyllium plagiosum (whitespotted bambooshark): 122562953
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Entry
122562953 CDS
T08871
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04020
Calcium signaling pathway
cpla04260
Cardiac muscle contraction
cpla04261
Adrenergic signaling in cardiomyocytes
cpla04270
Vascular smooth muscle contraction
cpla04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122562953
04020 Calcium signaling pathway
122562953
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
122562953
09153 Circulatory system
04260 Cardiac muscle contraction
122562953
04261 Adrenergic signaling in cardiomyocytes
122562953
04270 Vascular smooth muscle contraction
122562953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122562953
Ion channels [BR:
cpla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122562953
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
DUF2919
DUF3408
Motif
Other DBs
NCBI-GeneID:
122562953
NCBI-ProteinID:
XP_043572191
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All DBs
Position
26:complement(49632138..49804650)
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AA seq
1596 aa
AA seq
DB search
MGSDDSGSVDRGRDDGGHLSCQCCPLLHSFLLLTYVSVLQVNDAIGNEWPWIYFVSLILL
GSFFVLNLVLGVLSGEFSREREKAKSRGDFQKFREKQQLDEDLKGYLDWITHAEDIDLDH
INHGDGMLTSDEGGSMASQELLELEGMSLLSRVNWRCQRWNRLFRRKCRAVVKSDFFYWL
VIFLVFVNTLMIASEHHHQPDWLTDVQDHANKVLLALFTVEMILKMYSLGLQAYFVSLFN
RFDCFVVCGGILETILVEVEMMSPLGISVLRCIRLLRIFKITRYWTSLSNLVASLLNSVR
SIASLLLLLFLFIIIFSLLGMQLFGGKYNFDDMVVRRSTFDNFPQALLSVFQILTGEDWN
SIMNDGIMAYGGPSFPGVLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKEA
AEEKKRRKLERAANPGRTEEEKLLLKKLELAKLKAEGIPTTAKLKVDEFEANVNEVKEPY
PSADFPGDDEEEEPEFPLSPRPRPLAELQLKEKAVPMPNASSFFIFSPTNKLRKLCHRII
NATTFTNFILLFILLSSISLAAEDPIRAESFRNKILAYFDIAFTAIFTMEIILKMTAYGA
FLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKH
VVQCVFVAIKTIGNIVIVTTLLQFVFACLGVQLFKGKLFSCTDPSKMTEEDCKGQFIVYT
EPDQLSVQERMWVNSDFNFDNVLLAMMALFTVSTFEGWPQLLYKAIDSHTEDMGPIYNYR
VGISIFFIIYIILIAFFMMNIFVGFVIVTFQEQGEAEYKNCELDKNQRQCVQYALKARPL
MRYIPKNKYQYKVWYVVTSSYFEYLMFALILLNTVCLAMQHYEQSEEMNQLSDTLNVVFT
GLFALEMVFKLCAFKAKGYFGDPWNVFDFLIVIGSIIDVILSEVNTALASSGGLYCLSSR
CDSSESEDTSRISISFFRLFRVMRLVKLLSRGEGVRTLLWTFIKSFQALPYVALLIVMLF
FIYAVIGMQVFGKIANVDGAQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACRPGKLC
DPESDYMPGEEYTCGTNFAIFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHH
LDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPMNSD
GTVTFNATLFALVRTALKIKTEGNFEQSNEELRTIIKKIWKRTSMKLLDQVIPPIGDDEV
TVGKFYATFLIQEHFRKFKKRQEEYYGTLPSKKNQNQNEIVLQAGLRSIEEEVGDNLHRT
VSGELPVEEEGDQTMEEGGLDETIYRRTGGLFGGQSDSYPMDRSSSLQQHVTSQRPLQFS
KSEGGGEEPESPHSRPTDSPFNTTSFFPATDNANTNNANNTALSRVTYEDEFKKEITTFQ
CTGEDKAQVGRVRQAPVRLPAPEPYPNRQVQKTWSETTDTKRVKRDTTTPTLLPHSDQSV
DMNQICEYHRKLENLARCQTVNNLVKQVLTARGLQELASDPAFVAMTASEMAEACLMDHN
ELESTALSLVEGHSVSMEPKNNLSPEAQVDLPSSCC
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgatgacagtgggtcagttgaccgggggagagatgatggaggacatctatcc
tgtcaatgctgccctctccttcactctttcctgctgttaacctatgtttctgtcctgcag
gtcaatgatgctattgggaatgagtggccttggatctactttgtcagtctcatcctgctg
ggctcattctttgtgctgaacctcgtacttggtgtcctgagtggggagttttccagggag
agagagaaggccaaatcacggggagatttccagaagttcagagagaagcagcagctggat
gaggatctgaaaggttaccttgactggatcacacacgctgaggatattgacctggatcac
atcaaccatggagatggaatgctaacctcagatgaaggtggctccatggcttctcaggaa
ctgctcgagttggagggaatgagtctgctgtcacgtgtcaattggcgatgtcagaggtgg
aaccggctgttcaggcggaagtgcagagcagtggtcaaatctgacttcttctactggctg
gtgatattcctggttttcgtcaacactttgatgatagcgtcagagcatcaccatcagcct
gactggctgactgatgtacaggaccatgccaacaaggtgctgctagctctattcacagtg
gagatgatcctgaagatgtacagccttggcctgcaggcttactttgtctcactgtttaat
cgctttgactgctttgtcgtatgtggtgggatcctagagactattcttgtggaggtggag
atgatgtctccacttggaatttctgtcctccggtgtatccgactcctgagaatcttcaaa
atcaccaggtattggacttctctgagtaacctggttgcctccctgctgaactcagtccgt
tccattgcatccttactccttctcctcttcctgttcatcatcatcttctcattgctgggg
atgcaactgtttggtggaaagtataactttgatgacatggttgtgcgaaggagtacattt
gataactttcctcaggcactgctgagtgtgttccagatattgactggtgaggactggaat
tccattatgaacgatggcatcatggcctacggaggcccttctttccctggtgtgctggtc
tgcatttacttcatcatcctgtttgtttgtggaaactatattctgttaaatgttttcttg
gccatcgctgttgacaatctcgcagaggcagaaagtctgacatcagctcagaaggaagca
gcagaggagaagaagaggaggaagttggagagggctgccaacccgggccgaacagaggaa
gagaagctactgttgaagaaacttgaactggcaaagcttaaggcagagggcattcccacc
actgccaagctgaaagtggacgagtttgaagctaatgtcaatgaagtgaaggagccttat
ccttctgctgactttccaggtgatgatgaggaagaggagcccgagttccccctgagcccc
cgtcctcgtcctcttgctgagctccagctgaaagagaaggcagtccccatgcccaatgcc
agctccttcttcatcttcagcccgacaaacaaactacgcaagttgtgccacaggatcata
aatgcaaccacctttacaaacttcatccttctctttattctgttgagtagtatctcactg
gctgcagaagaccccatccgagcagagtccttccgtaacaagatccttgcctattttgat
attgcttttactgccattttcaccatggagattattctgaagatgacagcgtatggagcc
ttcctacataaaggctccttttgtcggaattacttcaatatcctggacttgttggtggtc
agtgtctccctcatctcctttggaattcaatcaagtgctatctctgtggtaaagatcctt
cgagtcctccgagtgctcagacctttgagagctattaacagagccaagggattaaagcat
gtggttcaatgcgtgtttgtagccatcaagaccatagggaacattgtgattgtgaccacc
ctcctccagtttgtctttgcctgcctcggggtgcagcttttcaagggaaagcttttcagc
tgcactgatccctccaagatgacagaagaagactgcaaaggccagttcattgtctatact
gaaccagatcagctgtcagtccaggagcgaatgtgggttaatagcgacttcaattttgac
aatgtgctgttggcgatgatggctctcttcacagtttccaccttcgaggggtggccccag
ttattgtacaaagccattgactctcacactgaagacatgggccctatctacaactaccga
gttggcatttcaatattcttcatcatctacatcattctcattgctttcttcatgatgaat
atctttgtggggtttgttattgtaacgttccaggaacagggagaggctgaatacaagaac
tgtgagctcgacaaaaaccagcgtcagtgtgtccagtatgccctgaaggcacgacccctc
atgagatacattcccaagaacaaataccagtacaaggtgtggtatgtggtgacctcctca
tactttgaatacctcatgtttgccctcatcctcctcaataccgtttgtctcgcgatgcag
cactatgagcaatcagaggagatgaaccagttgtcggacacgctgaatgtagttttcact
gggctattcgcattggaaatggtttttaaactttgtgctttcaaagctaaaggttatttt
ggagatccctggaatgtatttgacttcctgattgtcatcggcagtattatcgatgtgatc
ctcagtgaggtcaatacagctcttgcttccagtgggggtctctactgcctgagctctcga
tgcgactccagtgagtcagaggacacttcccgtatctccatctccttcttccgtctgttt
cgtgtgatgcgcctggtcaaattgctgagcagaggagagggggttcgaactttgctgtgg
acgttcatcaagtccttccaggctctaccctatgtggctctgctgattgtgatgttgttc
tttatctatgctgtcattgggatgcaggtctttggtaagattgccaatgtggacggagca
caaatcaatcgcaataataacttccagactttcccacaagctgtgctcctgctattcaga
tgtgccacaggtgaagcttggcaggagatcatgctggcctgccgacctggcaaactctgt
gaccctgaatctgactacatgcctggcgaagagtacacctgtggaaccaacttcgctatt
ttctacttcatcagtttttacatgctctgtgctttcttgattattaacctgtttgtggct
gtaattatggacaactttgattacctgacacgtgattggtccattctgggccctcatcac
ctggatgaatttaagaggatttgggccgagtatgatcctgaggccaagggacggatcaaa
cacctggatgttgtgacattgctccgtcgcattcagcctcctctgggctttggcaaattc
tgccctcaccgtgtggcctgtaagcgtttggtgtctatgaacatgcccatgaacagtgat
ggcacagtcaccttcaatgccacgctctttgctctggtacgaacggctctgaaaattaaa
accgaaggaaattttgaacagtcgaatgaggaactgagaaccatcatcaaaaaaatctgg
aaacgaacgagcatgaaattactggaccaagtgatccctccaataggagatgatgaggtg
acagttggcaagttctatgccacatttctaatccaagaacatttccgtaagtttaagaaa
cgtcaagaagaatattatggaactctcccatcaaagaagaaccagaatcaaaatgagatt
gtgctccaggctggattgcgcagtattgaggaggaggttggtgataatctccatcgaact
gtatctggagagctgccagttgaagaggaaggagaccaaacaatggaggaggggggcttg
gatgaaacaatttacaggagaactggtggtctgtttggaggacagtctgattcctatccg
atggacagaagtagctccttgcagcaacacgtgacaagtcaacggccgcttcaattcagt
aaatcagagggtggaggagaggagcctgaatcaccacacagcagaccgacagattcacca
tttaacacaaccagtttcttcccagcaactgacaacgcaaacacaaataatgcaaacaac
acagccctaagcagggttacctatgaagatgagtttaagaaggaaattacaacatttcaa
tgcacaggtgaagacaaagctcaagtgggcagggtcagacaagccccagttcgactgcca
gctccagagccataccccaaccgtcaagtacagaaaacttggtcagaaacaacagacacc
aagagagtgaaaagagacacgacaacaccaacattgttaccacacagcgaccagagtgtg
gacatgaaccaaatctgtgagtaccatcgcaaactcgagaacttggcaagatgtcaaact
gttaacaacctggtaaaacaggtgctgacagcccgtggattacaggaactggctagtgac
ccagccttcgtggcaatgactgcgagtgagatggcagaagcttgcctgatggatcacaat
gagctggagagcacagcactgagcctggtggaaggccactcagtatcaatggaacccaaa
aacaacctctcacctgaagcccaggtggatctgccatccagctgctgctga
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integrated database retrieval system
