Cavia porcellus (domestic guinea pig): 100170760
Help
Entry
100170760 CDS
T07777
Symbol
Vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04820
Cytoskeleton in muscle cells
cpoc05169
Epstein-Barr virus infection
cpoc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100170760 (Vim)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100170760 (Vim)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100170760 (Vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100170760 (Vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpoc04812
]
100170760 (Vim)
04147 Exosome [BR:
cpoc04147
]
100170760 (Vim)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100170760 (Vim)
Cytoskeleton proteins [BR:
cpoc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
100170760 (Vim)
Exosome [BR:
cpoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100170760 (Vim)
Exosomal proteins of other cancer cells
100170760 (Vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
FKBP15
DUF1664
TolA_bind_tri
KIF21A_4th
DUF7491
GeBP-like_DBD
RBD-FIP
TPR_MLP1_2
DUF4515
Motif
Other DBs
NCBI-GeneID:
100170760
NCBI-ProteinID:
NP_001166511
Ensembl:
ENSCPOG00000001054
UniProt:
B5A9S3
LinkDB
All DBs
AA seq
464 aa
AA seq
DB search
MSTRSSSSYRRVFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSVSRTVYASSPGGAFV
TRSSASRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVR
FLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLTEDI
MRLREKLQEEMLQREEAESTLQSFRQDVDNACLSRLDLERKVESLQEEIAFLKKLHDEEI
QELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAA
NRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTI
GRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISMPLPNFSSLN
LRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtcctcctcctcctaccgcagggtgttcggcggccccggcaccgccagc
cggccgagctccagccggagctacgtgaccacctccacccgcacctacagcctaggaagc
gcgctgcgccccagcgttagccgcaccgtctatgcctcgtcccccggcggagcttttgtc
actcgctcctcggcctcgcgcctgaggagcagtgtgccgggggtgcggctgctgcaggac
tcggtggacttctcgctggccgacgccatcaacaccgagtttaagaacacccgcaccaat
gagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaaggtgcgc
ttcctggagcagcagaacaagatcctgctggccgagctcgaacagctcaagggccagggc
aagtcacgcctgggggacctctatgaggaggagatgcgagagctgcgtcggcaggtggac
cagctcaccaacgacaaagcgcgcgtggaggtggagcgcgacaacctgaccgaggacatc
atgcgcctccgggagaaattgcaggaagagatgcttcagagagaggaagccgagagcacc
ctgcagtctttcagacaggatgtggacaacgcatgtctgtcacgtcttgaccttgaacgt
aaggtggaatctttgcaagaagagattgcctttttgaagaaactacatgatgaggagatc
caggagctgcaagcccagattcaggaacagcacgtccagattgacatggatgtgtccaag
cctgacctcacggctgccctgcgtgatgtacggcagcagtatgaaagcgtggctgccaag
aacctccaggaggcagaagagtggtacaagtccaagtttgctgacctctccgaggctgcc
aaccggaacaatgatgccttgcgccaggcaaagcaggagtccaatgagtaccggagacag
gtgcagtccctcacctgtgaagtggatgcactcaaaggaactaatgagtccctggaacgc
cagatgcgtgaaatggaggagaactttgctgtggaagctgctaactaccaagacactatt
gggcgtctgcaggatgagattcagaacatgaaagaagagatggctcgtcatcttcgtgaa
taccaagacctgctcaatgttaaaatggctcttgacattgagatcgccacctacaggaag
ctgctggaaggcgaggagagcaggatttctatgcctcttccaaacttttcctccctgaac
ctaagggaaaccaatctggaatccctccctctggttgacacccactcaaaaaggacactt
ctgattaagacagttgagactagagatggacaggttatcaatgaaacttctcagcatcat
gatgaccttgagtaa
DBGET
integrated database retrieval system