KEGG   Cavia porcellus (domestic guinea pig): 100170760
Entry
100170760         CDS       T07777                                 
Symbol
Vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc04820  Cytoskeleton in muscle cells
cpoc05169  Epstein-Barr virus infection
cpoc05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100170760 (Vim)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100170760 (Vim)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100170760 (Vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoc03019]
    100170760 (Vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cpoc04812]
    100170760 (Vim)
   04147 Exosome [BR:cpoc04147]
    100170760 (Vim)
Messenger RNA biogenesis [BR:cpoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     100170760 (Vim)
Cytoskeleton proteins [BR:cpoc04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     100170760 (Vim)
Exosome [BR:cpoc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100170760 (Vim)
  Exosomal proteins of other cancer cells
   100170760 (Vim)
SSDB
Motif
Pfam: Filament Filament_head FKBP15 DUF1664 TolA_bind_tri KIF21A_4th DUF7491 GeBP-like_DBD RBD-FIP TPR_MLP1_2 DUF4515
Other DBs
NCBI-GeneID: 100170760
NCBI-ProteinID: NP_001166511
Ensembl: ENSCPOG00000001054
UniProt: B5A9S3
LinkDB
AA seq 464 aa
MSTRSSSSYRRVFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSVSRTVYASSPGGAFV
TRSSASRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVR
FLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLTEDI
MRLREKLQEEMLQREEAESTLQSFRQDVDNACLSRLDLERKVESLQEEIAFLKKLHDEEI
QELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAA
NRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTI
GRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISMPLPNFSSLN
LRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtccaccaggtcctcctcctcctaccgcagggtgttcggcggccccggcaccgccagc
cggccgagctccagccggagctacgtgaccacctccacccgcacctacagcctaggaagc
gcgctgcgccccagcgttagccgcaccgtctatgcctcgtcccccggcggagcttttgtc
actcgctcctcggcctcgcgcctgaggagcagtgtgccgggggtgcggctgctgcaggac
tcggtggacttctcgctggccgacgccatcaacaccgagtttaagaacacccgcaccaat
gagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaaggtgcgc
ttcctggagcagcagaacaagatcctgctggccgagctcgaacagctcaagggccagggc
aagtcacgcctgggggacctctatgaggaggagatgcgagagctgcgtcggcaggtggac
cagctcaccaacgacaaagcgcgcgtggaggtggagcgcgacaacctgaccgaggacatc
atgcgcctccgggagaaattgcaggaagagatgcttcagagagaggaagccgagagcacc
ctgcagtctttcagacaggatgtggacaacgcatgtctgtcacgtcttgaccttgaacgt
aaggtggaatctttgcaagaagagattgcctttttgaagaaactacatgatgaggagatc
caggagctgcaagcccagattcaggaacagcacgtccagattgacatggatgtgtccaag
cctgacctcacggctgccctgcgtgatgtacggcagcagtatgaaagcgtggctgccaag
aacctccaggaggcagaagagtggtacaagtccaagtttgctgacctctccgaggctgcc
aaccggaacaatgatgccttgcgccaggcaaagcaggagtccaatgagtaccggagacag
gtgcagtccctcacctgtgaagtggatgcactcaaaggaactaatgagtccctggaacgc
cagatgcgtgaaatggaggagaactttgctgtggaagctgctaactaccaagacactatt
gggcgtctgcaggatgagattcagaacatgaaagaagagatggctcgtcatcttcgtgaa
taccaagacctgctcaatgttaaaatggctcttgacattgagatcgccacctacaggaag
ctgctggaaggcgaggagagcaggatttctatgcctcttccaaacttttcctccctgaac
ctaagggaaaccaatctggaatccctccctctggttgacacccactcaaaaaggacactt
ctgattaagacagttgagactagagatggacaggttatcaatgaaacttctcagcatcat
gatgaccttgagtaa

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