Cavia porcellus (domestic guinea pig): 100233224
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Entry
100233224 CDS
T07777
Symbol
Trpc4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04360
Axon guidance
cpoc04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100233224 (Trpc4)
09158 Development and regeneration
04360 Axon guidance
100233224 (Trpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100233224 (Trpc4)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100233224 (Trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
BAR_4
Motif
Other DBs
NCBI-GeneID:
100233224
NCBI-ProteinID:
NP_001166533
Ensembl:
ENSCPOG00000011742
UniProt:
B8Q886
LinkDB
All DBs
AA seq
898 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSMCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALHPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRAQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTAQGASATKESSNPA
DSDEKSDNEEEVARQQAAGPLGRNIQLESRGLATRGDLSIPGLSEQCVLVDHKERNTDTL
GLQVGKRVCSFKSEKVVVEDTVPIIPKERHDKDEDSSTDYDLTPTDTGAHEDYVTTRL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgtgaatgccccctacagagatcgcatccccctg
aggattgtccgagcagaatcagaactctcaccatcagaaaaagcctacttgaatgctgtg
gaaaagggggactatgcaagtgtcaagaaatccctagaggaagcggaaatttattttaaa
atcaatattaattgcattgatcctctcggaaggacagcgctcctgattgccattgagaat
gagaacctggaactcattgagctcctcttaagcttcaatgtctatgtcggagatgctctg
ttacacgctatcaggaaagaggttgttggagctgttgagctgctgctgaaccacaaaaag
ccaagtggagaaaaacaggtgcctcccatactccttgataagcagttttctgaatttact
ccggacattaccccaatcattttggcagcccatacaaataactatgagataatcaaactt
ttagtccagaaaggcgtctctgtgccccgaccccacgaggtccgttgtaactgtgtggag
tgcgtgtccagctcagacgtggacagcctgcgccactcgcgttccagactcaacatctac
aaggccctggccagtccctcgctcattgcgctgtccagcgaagacccttttctcacagcc
tttcagctcagctgggagcttcaggaactgagcaaagtggaaaatgaatttaagtcagag
tatgaggagctgtcacgacagtgcaagcagtttgcaaaggacctcctggatcagacgagg
agctccagagaactggaaatcattctaaattaccgagacgacaatagtctgcttgaagaa
caaagtggaaatgatcttgcaaggctaaaactggccattaagtaccgtcagaaagagttt
gttgcccagcctaactgtcaacagttgcttgcatctcgttggtatgatgagtttcctggc
tggaggagaagacactgggcagtgaagatggtgacgtgtttcatcataggacttcttttt
cctgtcttctctatgtgctacctgatagctccgaagagcccccttggactgttcatcaga
aagccatttatcaagtttatctgccacacggcctcctatttgacttttttgttcctgctg
ctgcttgcctcccaacacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacag
atgtgggacggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaactccttatatttagcaacaatctccttgaagatagttgcgtttgtaaagtacagt
gctcttcatccgcgagaatcctgggacatgtggcaccccactctggtggctgaagcttta
tttgctattgcaaacatcttcagttccctgcgtctgatctcactgtttactgcaaattct
cacctgggacctctgcaaatatctctgggaagaatgcttctagacattctgaagtttctg
ttcatatactgtcttgtgttgctggcatttgcgaatggtctaaatcaactttatttctat
tacgaagaaacaaaggggttaagctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttccacgttatttgagacactccagtcactgttttggtcaatatttgggctcatcaat
ctgtatgtaaccaatgtgaaagcacagcatgaattcacagagtttgttggtgccaccatg
tttgggacatacaatgtcatctctctggttgtcttactcaacatgctaatagctatgatg
aacaattcttaccaactaattgctgaccatgcagatatagagtggaaatttgctcgaaca
aagctctggatgagctactttgaagaaggaggaactctgcccactcccttcaatgtcatc
cccagtcccaagtctctgtggtacctgatcaaatggatatggacccatctgtgcaagaaa
aagatgagaagaaagccagaaagttttggaacaataggggtaagagcacagcataggcga
gctgctgataatctgagaagacatcaccaatatcaagaagttatgaggaacctggtgaag
cgctatgtcgcagcgatgattagagatgctaaaacagaagaaggcctgacagaagagaat
tttaaggaactaaagcaagacatttctagtttccgctttgaagttctgggcttactccga
gggagcaaactctccaccgcacaaggtgcaagtgccaccaaggagtcttcgaatccagca
gactcagacgaaaagagtgataacgaagaagaagttgctcgtcaacaggctgcgggacca
cttgggagaaatattcagctggagtcccgaggattagccacacggggtgacctgagcatt
cccggtctcagtgaacagtgtgtgttagtagaccataaagaaaggaatacggacacactg
ggtttgcaggtaggcaagagagtgtgttcgttcaagtcagagaaggtggtggtggaggac
actgtgcccatcataccaaaggagagacacgacaaggacgaggactccagtacagactac
gacttaacccccacagacacaggggcccacgaggactacgtgaccacaagattgtga
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