Cavia porcellus (domestic guinea pig): 100718450
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Entry
100718450 CDS
T07777
Symbol
Ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100718450 (Ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100718450 (Ttc37)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
100718450 (Ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_8
TPR_12
TPR_14
TPR_CcmH_CycH
TPR_17
TPR_11
ANAPC3
TPR_9
ARM_TT21_C
Fis1_TPR_C
TPR_15
ARM_TT21_2nd
TPR_30
Sel1
YceG_bac
Sey1_3HB
BTAD
ARM_TT21_5th
HrpB1_HrpK
TPR_20
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
100718450
NCBI-ProteinID:
XP_003479494
Ensembl:
ENSCPOG00000013739
UniProt:
H0VPF4
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MIAIRICPRWKAGKEQSEIQFIKKTEVVTGKRMSSKEVKTALKSARDAIRNKEYKEALKH
CKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQGAYKKAVELEPDQLLAWQGLASLYEKCS
QMNAKDDLPGVYQKLLDLYESVDKQKWCDVCKKLVDLYHQEKKHLEVARTWHKLIKTRQE
EGADKQELYQLWRKLTQLLAESIEDQNNETQQLLLTAFENALGLSDQIPSEDHQQLYRHF
IQCLSKFPHETARLKKACEGMINTYPTVHYPLEVLCLHLIESGNITDEGQQYFCKLLEMN
SKSGPALIGIGIKALQDKKYEDAVRSLTEGLEARPLCTHGWYHLAKAQIKMHRPKEAVLS
CNQALKNIDDAGVPGSSLRQKNPCLCLKAEALIKLSDSESSEEAIRTLDQVSDANNIPGL
LVLKSLAYLNKGSLDEATKIMEDLLLSHPNLAEAHALEALIHFAKKDYLQAEKCLQIAIE
KDAEVAEYHYQLGLTYWLMGEETRKDKGKALTHFLKAARLDTYMGKVFCYLGHYYKDVAG
DKNRARGCYRKAFELDDTDTESGAAAVDLSVELEDTETALAILTTVTQKASAGTAKWAWL
RRGLHYLKAGQHSQAVADLQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTKASELN
PKSTYSVFKVAAIQQTLGKYKEAIAQYQLIIKEKEDYVPALKGLGECHLMMAKAALVDYL
DGKAVDYIEKSLEYFTWALQYRADASCLWKLVGDACTSLYAVSPSKVNVNVLGVLLGQKE
GKQMLKKNELIHLGGRCYGRALKLMSTSNTWCDLGINYYRQAQHLAETGNNMSDLKELLE
KSLQCLKKAVRLDSKNHLYWNALGVVACYSGIGNYALAQHCFIKSIHSEQINAVAWTNLG
VLYLANEKIEQAHEAFKMAQSLDPSYLMCWIGQALIAETIGSYDTMDLFRHTTELNMHTE
GAIGYAYWVCTTLQDKSNRETELYQYNILQMNAIPAAQVVLCKYVGRIQNYAPAFTMLGY
LNEHLQLKKEAAEAYQRAILLLQTAEDRDTYNVAIRNYGRVLCSIGEYDKAIHAFKSTPL
EDLEEIIGFALALFMKGQYTESSKAYERALSIVESEQDKAHILTALAITEYKQGKMDVAK
SLLFKCSILKEPTTESLQTLCALGLAMQDATLSKAALNELLKHIKHKDSDYPQCLLTLAI
YALQGASAAVQRQASRAVHSNPADPALWALLSRVVAQHTQRSAKGGAVAGNVAHILDSNH
GKKALLYTAVNQLAMGSTSVEEKNIALKTIQKAALLSPGDPAVWAGLMAACHADDKLALV
NSTPPKRMDLYLALLSAVSASMKDKKCLENYNQSLEKWCLSQAVTGLLDTGRIAEAESLC
TQNLKSKPDQPAVILLLRQVQCKSLLQSQKPLPDAVLEELQKTVLSNSTSVPAWQWLAQV
YQSQGMMSAAEMCYRKSLQVASQQGSWSGKLSSLLKLALLALEVCMANISSDHWPSLVQE
ATAEALKLCFCPLAVLLQALLQFSRKMGARETRRLLERVVYQPGYPKSMASTARWYLLRH
LYAKNDYELIDVLVKNAETHRDKRALELNQKLSSE
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgattgctatcaggatctgtcccagatggaaagcaggcaaggaacaatctgaaattcag
ttcataaagaagacagaagtggtgacaggtaaaagaatgtccagcaaagaagtgaagact
gctctaaagagtgcacgagatgcaatcagaaacaaagaatacaaggaagctttgaaacat
tgtaagacagtgttgaaacaagaaaagaataactataatgcctgggtttttattggtgtt
gctgcagccgagctagaacaacctgatcaggctcagggagcctataagaaagctgtagaa
ctagaaccagaccaattactagcctggcaggggttagcaagcctgtatgagaagtgtagt
caaatgaatgccaaggatgatttaccaggcgtttaccaaaagctcttggatctttatgaa
agtgttgacaaacagaagtggtgtgatgtctgtaagaaacttgtggatctgtatcaccaa
gaaaagaaacacctagaggtggctcgaacatggcacaaattgattaagacaaggcaagaa
gaaggtgcggacaaacaagaactttaccagctatggaggaaattgacgcagttgctggca
gagagtatagaagatcagaataatgaaacccagcaattgcttttgactgcgtttgagaat
gcactgggcttatcagatcagattcctagtgaagaccaccaacaactttatagacatttc
attcagtgtttgtccaaatttcctcatgagactgctagattgaagaaggcctgtgaagga
atgataaacacctatcccactgtacattacccattagaagtgctttgtttgcatttaatc
gagtcaggaaatattactgatgaagggcagcagtatttttgtaaactactagaaatgaat
tcaaaaagtggcccagccctcattggcataggcattaaagcattacaagacaaaaagtat
gaagacgctgtcaggagtctaacagaagggttagaggcacgccctctctgcacacatgga
tggtaccatctggcaaaagcccagatcaaaatgcatagacctaaggaagctgttctttct
tgcaatcaagctctgaaaaacatagatgatgctggtgttcctggcagcagcctccgtcag
aagaatccttgtctttgtctgaaagcagaggctttgattaaactctcagactcagaatct
tcggaggaggcgattcgtactcttgatcaggtttcagatgcaaataatatcccaggactt
ttggttctgaaaagcttggcctatctgaacaagggctcattagatgaagctacaaagatt
atggaagaccttctcttgtctcaccccaacctagctgaagctcatgccctcgaggctttg
attcattttgccaaaaaggactatctacaagcagaaaagtgtttgcagatagcaattgag
aaagatgctgaagtggctgagtatcattaccagcttgggttaacgtactggctcatgggt
gaagaaacaagaaaagataaaggaaaggctcttacccactttctaaaggctgcaagactg
gacacatacatgggcaaagttttctgctatttaggtcattactacaaagatgtagcagga
gataaaaacagagcccgtggttgctacagaaaagctttcgaactggatgacactgatact
gaatctggagctgcagccgttgacctaagtgtggagcttgaggatacggagactgcctta
gccatcttaacgacagtaactcagaaggcgagcgctggaacggcaaagtgggcctggctg
agacggggtctgcactacctgaaagctggtcagcattcccaagcagtggctgatttacag
gcagcattaagggcagacccaaaagatttcaattgctgggagtctttgggagaggcctac
ttaagcagaggtggctacacaacagccttgaagtccttcacaaaagccagtgagctgaac
ccaaagtccacatacagtgtgtttaaggttgcagcaatacagcaaactctaggcaagtat
aaggaggccatagctcagtaccagctgatcattaaagagaaagaagattacgtgcctgct
ctgaaaggtttgggcgaatgccatcttatgatggcaaaagcagctttagttgattatctt
gatggaaaagctgtagactacatagaaaaatcactggaatattttacatgggctctgcag
taccgagctgatgcgtcctgcctttggaagctggttggggatgcttgtaccagtctctat
gctgtttctccatcgaaagtgaatgttaatgttttaggtgtccttctgggtcagaaagaa
gggaaacagatgttaaagaaaaacgagcttatccatctcggaggaaggtgttatggccgt
gcactaaaactgatgtctacttccaacacgtggtgtgatcttggaattaattattatcgc
caagcacaacatttagcagaaacaggcaacaacatgagtgatcttaaagaactgctagag
aaatctttgcagtgtctgaaaaaggcagtgagactggacagtaaaaaccacttgtactgg
aacgctcttggtgtggttgcatgttacagtggtattggaaattatgccctcgctcaacac
tgtttcatcaaatcaatccactcagagcagattaatgctgtcgcgtggaccaacttggga
gtgttataccttgcaaatgaaaaaatcgagcaagctcatgaagctttcaaaatggctcag
tcccttgatccatcttatttaatgtgctggattggacaagctcttattgcagagacgatc
ggaagttatgacacaatggatctcttcaggcataccacagaactcaacatgcatactgag
ggagcaataggttatgcatattgggtctgtacaacactgcaagataaaagcaacagagaa
acagaactgtaccagtacaacatcctccagatgaatgctatcccagcagcacaagttgtt
ctgtgtaaatatgtgggaagaattcagaattatgctccagctttcacaatgttggggtac
ttgaatgaacatctgcaactgaaaaaggaagctgcagaggcgtaccaaagggcaattttg
ttgttacagactgcagaagaccgagatacctacaatgtcgccataagaaactatggcagg
gtgttatgttccatcggtgaatatgacaaagctatccatgcttttaagtcaacacccctt
gaagatttagaagagatcataggctttgcgttggctttatttatgaaggggcagtataca
gagagcagcaaagcttacgagcgagccttgtctattgttgaatcagagcaagacaaagcc
catatcttaacagctttggcaataacagagtataaacaaggaaaaatggatgtggccaag
tcactgctattcaaatgctctatcttaaaggagccaaccacagaaagccttcaaaccctc
tgtgctctagggctggcaatgcaggatgcgacactgtcaaaggcagcgcttaatgagctg
ctgaagcacatcaaacacaaagacagtgactaccctcagtgccttctcaccttggccatc
tacgcgctgcagggcgccagtgcggctgtgcagagacaggcatcaagagctgtgcacagt
aacccagctgacccggctctttgggctctgttgtctcgagttgttgctcagcacacccag
cgaagtgcgaagggaggtgctgtggcaggaaatgtggctcatattctggattcaaatcat
ggaaagaaggcgttgctgtacactgctgtgaatcagttggcaatgggaagcacttcagtg
gaagaaaagaatattgccctaaagaccattcagaaggcagcgctcctttctccaggtgac
cctgctgtctgggccgggctgatggcagcctgtcacgcagatgataaactggctcttgtg
aacagcactccaccaaagagaatggatttatacttggcactgttatctgctgtttctgct
tcaatgaaggacaaaaaatgtctggaaaattacaaccaatctctggagaagtggtgcctg
tcccaagctgtcactggtctgctggacacaggaagaatagctgaggccgagtctctctgc
acacagaacttaaaaagtaaacctgatcagccagccgttatcttacttttgagacaagtt
cagtgtaaatcactccttcagtcacaaaagccactccctgacgctgtgcttgaggaactg
cagaaaacggtcctgtccaactccacctctgttccagcttggcagtggctggcccaagtg
tatcagtctcaaggaatgatgagcgctgcggagatgtgctacagaaagagtttgcaagtg
gcgtctcagcagggcagttggagtgggaagctctcgagtctcttgaaactcgcattgctt
gcattagaagtctgcatggctaatatttccagtgatcattggccatccttggttcaagag
gctacagctgaggccttgaagctttgcttttgtccactggctgttcttttgcaagctttg
ttacaattcagtcgcaaaatgggggcaagagagacccggcgacttttggagagagtggtg
tatcagcctgggtatcccaaatctatggcatcaactgcgcgttggtacctactgagacat
ctgtatgccaaaaatgactatgagcttatcgatgtattggtaaaaaatgctgaaactcac
agagacaaaagagcactggaactgaatcagaaattgtcctccgaataa
DBGET
integrated database retrieval system
