Cavia porcellus (domestic guinea pig): 100725525
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Entry
100725525 CDS
T07777
Symbol
Col9a2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04151
PI3K-Akt signaling pathway
cpoc04510
Focal adhesion
cpoc04512
ECM-receptor interaction
cpoc04820
Cytoskeleton in muscle cells
cpoc04974
Protein digestion and absorption
cpoc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100725525 (Col9a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100725525 (Col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100725525 (Col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100725525 (Col9a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100725525 (Col9a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100725525 (Col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpoc00535
]
100725525 (Col9a2)
Proteoglycans [BR:
cpoc00535
]
Extracellular matrix (ECM) proteoglycans
Others
100725525 (Col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100725525
NCBI-ProteinID:
XP_023416890
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MAATVPRGLLVLLQVLGLALAQMKGPPGEPGPPGPPGPPGMPGSDGIDGDKGPPGKAGPP
GPKGEPGKPGPDGPDGKPGIDGLTGAKGEPGPIGTPGVKGQPGLPGPPGLPGPGFAGPPG
PPGPVGLPGEIGTPGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAGA
KGPPGLQGVKGIRANAGLGDPGXPGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPK
GEMGPRGYKGMVGSIGAAGSPGEEGPRGPPGRPGEKGDVGSQGVRGHQGMTGPKGAAGSP
GIDGKDGTPGIPGMKGSAGQAGRPGNPGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPGFS
GPPGKEGEPGPRGEIGPRGILGQKGDQGERGPVGQPGPQGRPGPKGEQGPPGIPGPQGLP
GIKGDQGFPGRSGPAAEWLSLSARWDEGAGGCALGSLPLPDLSSRCLQGESGEPGPKGQQ
GVRGEPGYRGPSGDAGAPGVQGYPGLPGPRGLAGERGVPGQPGRQGVAGRNLSDQHIVNV
VLKKMQEQLAEVAVSAKREALGAAGMMGPPGPPGPPGYPGKQGPHGHPGPRGIPGVIGAV
GQIGNTGPKGKRGEKGDRGDVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGE
AGRPGLPGPMGLPGFCEPAACLGASAYTSARLTEPGSIKGP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccgtcccccgaggcctcctcgttctcctccaggtgctcgggctcgcgctg
gcgcagatgaaaggcccgccaggagaaccgggcccccctggcccaccagggccgccggga
atgcctggatcggatggcatcgacggtgacaaggggcctcctgggaaagctggccctccg
gggcccaagggagagccgggcaaaccagggccggatgggccggatgggaagccggggatt
gatggtttaactggagccaagggggagcctggtcctataggaacacccggagtcaagggc
cagcctgggctcccaggtccccctggtctgccaggccctggttttgctggacctccgggg
ccacctggacctgttggcctccctggtgagatcggaactccaggccccaagggagatcca
ggaccggaaggaccatcaggacccccagggccccccgggaaacccggacgccccggaacc
atccaaggcctggaagggagtgctgatttcctgtgtccaaccaactgtccagcgggtgcc
aaaggccctcctgggctgcaaggtgtgaagggcatccgggcaaacgcgggtctgggtgac
cctggcnngccagggaagccgggtcccaaaggagatgtgggtgcctctggagagcaaggc
atccctggaccaccggggccccagggcatcaggggctacccaggaatggcaggacccaag
ggagagatgggtccccgtgggtataaaggaatggtgggctccattggtgctgctgggtca
ccgggtgaggaaggtccaagggggccaccaggccgacctggggagaagggcgacgtgggt
agccaaggcgtgcgaggacaccaggggatgacaggcccgaagggagcagctggctcccca
ggcatcgatggcaaggacgggaccccaggcattccaggcatgaaaggcagcgcaggacag
gcagggcgtccagggaacccaggccaccagggcctagcgggtgtgccaggccagcctgga
acaaaaggaggcccgggagacaagggtgaaccaggccagcagggcctccctggattctct
ggtccccctgggaaggagggagagccagggcctcgaggagaaattggtccccggggcatc
ctggggcagaagggtgaccaaggtgaaaggggccctgtagggcagccaggccctcaagga
cggccgggtcccaagggggaacagggcccccctggaattccagggccccaaggcttacca
ggcatcaagggagaccagggctttccgggaagatcgggccccgcggcggagtggttgagt
ctcagcgctcgctgggatgagggcgccgggggctgcgcgctggggtccctgccgctccct
gacttaagctcccgctgtctgcagggcgagtctggcgagcccgggcccaagggacagcaa
ggagtccgcggagaacccggctaccgtggccccagcggggatgcgggggctccaggggtg
cagggctacccggggctgcccggccctcgaggattggcgggagaacgaggcgtgccagga
cagcccgggagacagggcgtggcgggccggaatctcagtgaccagcacattgtaaacgtg
gtgctgaagaagatgcaagagcaactggcagaggtggctgtgagtgccaagcgggaagcc
ctaggtgcagcagggatgatgggtcctccaggaccccctgggccaccaggatacccaggc
aagcagggaccccatggacaccctggcccccgaggcattcctggtgtcataggagccgtg
ggtcagattggcaacacaggacccaaggggaagcgtggagagaaaggtgatcgaggtgac
gtaggacgtgggcaccctgggatgcctggtccccccgggatcccaggactccctggcagg
cctggccaggcaatcaacggcaaggatggagaccgaggatccccaggggctccgggagaa
gcaggccgacctggcctgccaggccccatgggactgcctggcttctgtgagcctgcagct
tgtcttggagcgtcagcctatacctctgcccgcctcacagagcctggatccattaaggga
ccctga
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