Cavia porcellus (domestic guinea pig): 100732533
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Entry
100732533 CDS
T07777
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
cpoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100732533
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100732533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100732533
03041 Spliceosome [BR:
cpoc03041
]
100732533
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100732533
mRNA cycle factors
Common to processing body (P body) and stress granule
100732533
Spliceosome [BR:
cpoc03041
]
Common components
Common spliceosomal components
hnRNP proteins
100732533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
DUF4715
Motif
Other DBs
NCBI-GeneID:
100732533
NCBI-ProteinID:
XP_012998661
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETADESLRSHFEQWGTLTDCVVMRDPNTKRSRGFEFV
TYATVEEVDAAMNARPHKVDGRVVEPKRADSREVSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSRKKRGFAFVTFDDHDSVDKIVIQKYHTLNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGCGGGFGGNDSFGHGGNFSGXGGFGGSHGGGGYGGS
GDGYNGFGNDGSNYGGGGSYNEFGSYNNQSSNFGHMKGGNFGGRSSWPYGGGGQYFTKPR
NQGGYGGSSSSSSYGSGRRF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtctcctaaggagcctgaacagctgcggaagctcttcattggaggg
ctgagctttgaaacagctgatgagagtctgagaagccattttgagcaatggggcacactc
acagattgcgtggtaatgagagatccaaacaccaagcgttccaggggctttgagtttgtc
acttacgccactgtggaggaggtggatgcagctatgaacgcgaggccacacaaagtggat
ggaagagttgtggaaccaaaaagagctgactcaagagaagtttctcaaagaccaggtgcc
catttaacagtgaagaagatctttgttggtggcattaaagaagacactgaagaacatcac
ctacgagattattttgaacagtacggaaaaattgaagtgattgaaatcatgactgaccga
ggcagtagaaaaaagagaggctttgcttttgtaacctttgatgaccatgattctgtggat
aagattgtcattcagaaataccatactctgaacggccacaactgtgaagtaaggaaagcc
ctgtcaaagcaggagatggctagtgcttcatctagccaaagaggtcgaagtggttctgga
aattttggtggtggttgtggaggtggttttggtggcaatgacagttttggtcatggagga
aacttcagtggttgaggtggctttggtggcagccatggtggaggtggatatggtggcagt
ggggatggatacaatggatttggtaatgatggaagcaattatggaggtggtggaagctac
aatgaatttggcagttataacaatcagtcttcaaattttggacacatgaagggaggaaac
tttggaggcagaagctcttggccctatggtggtggaggccaatactttaccaaaccacga
aatcaaggtggctatggtggttccagcagcagcagtagctatggcagtggcagaaggttt
taa
DBGET
integrated database retrieval system
