Cavia porcellus (domestic guinea pig): 100733548
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Entry
100733548 CDS
T07777
Symbol
Pcdh17
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-17
KO
K16499
protocadherin delta 2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoc04515
]
100733548 (Pcdh17)
Cell adhesion molecules [BR:
cpoc04515
]
Cadherins
Protocadherins
100733548 (Pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
100733548
NCBI-ProteinID:
XP_023416284
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQAGLPPAERGGSGGRS
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYMVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAXPAGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGGLGGPGGSVPFKLEENY
DNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYV
LQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALR
SFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVP
RNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPV
VELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIATLSTISII
LLAAMVTIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERN
AVNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLAVPQGHAGCHTSFTG
QGTNSSETPATRMSIIQTDNFPAEPNYMGSRQQFVQSNSTFKDPERASLRDSGHGDSDQA
DSDQDTNKGSCCDMSVRKALKMKTTSAKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQF
PAANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPY
LKAKRALSPLLQEVPSASSSPTKACIEPCTSTKSSLEGCEAKPGALAEASGQYLPNDSQY
LSPSKQQRDPPFAPSDQMARVFADVHSRASRDSSEMGAVLEQLDHSGRDLGRESVDAEEV
VREIDKLLQDCRGNDPVAVRK
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgctttctcctatgggcccctgccctgacgctcaagaac
ctcaactactcagtgccagaggagcaaggggccggcacggtgataggtaacataggcaag
gatgctcgcctgcaggcaggacttccgccggctgagcgcgggggcagcggcgggcgaagc
aagtcgggcagctaccgggtgctggagaactcggcgccgcacctgctggacgtggacgcc
gatagcgggcttctctacaccaagcagcgcatcgaccgtgagtccttgtgccgccacaat
gccaagtgccagctatctctcgaggtattcgccaacgacaaggagatctgcatgatcaag
gtagagatccaggacatcaacgacaacgctccctctttcccctctgaccagattgaaatg
gacatctcagagaacgctgccccgggcactcgctttccccttaccagcgcacacgacccg
gacgccggcgagaacgggctccgcacctatctgcttacgcgcgatgaccacggtctcttt
gccctggacgtcaagtcccgcggcgacggcaccaaattcccagagctggtcatccagaag
gcgttggaccgcgagcaacagaaccaccacacgctcgtgctgactgccctggatggcggg
gagccgccacgctccgccaccgtgcagatcaacgtgaaagtgatcgactccaacgacaac
agccctgtcttcgaagcgccctcttacatggtggaactgcccgagaacgctcccctgggc
accgtggtcatcgatctgaacgccaccgacgcggacgagggccccaacggcgaagtgctc
tattccttcagcagctacgtgcccgaccgcgtgcgggagctcttctccatcgatccgaag
accggcctgatccgggtaaagggcaacctggactatgaggagaacgggatgctggagatc
gacgtccaggccagagacctgggccctaaccccatcccggcccactgcaaggtcacagtc
aagctcatcgaccgaaacgacaacgcgccgtccatcggtttcgtctccgtgcgccagggg
gcgctgagcgaggccnngcccgccggcactgtcatcgccctggtgcgggtcaccgaccgg
gactcgggcaagaacggacagctgcagtgtcgcgtcctgggtggaggagggacaggcggt
ggcggcggcggcctgggcgggccaggggggtctgtccccttcaagctggaagagaactac
gacaacttctacacggtggtgaccgaccgcccgctggaccgcgagacccaggacgagtac
aacgtgaccatcgtggcgcgggacgggggctcgcctccgctcaactctaccaagtcgttc
gcagtcaagattctggacgagaacgacaaccctccccgcttcaccaaaggactgtacgtg
ctgcaggtgcatgagaataacattccaggcgaatacctgggttccgtcctcgcccaggac
cctgacctgggccagaacggtaccgtgtcctactccattttgccctcgcacattggcgac
gtgtccatctacacctacgtgtctgtgaaccccaccaacggggccatctacgccctgcgc
tcctttaactacgagcagaccaaggcttttgagttcaaggtgctcgcgaaggactcgggg
gcgccggcgcacttggagagcaacgccacagtgcgggtgaccgtgttagacgtgaacgac
aacgcgccggtgatcgtgctgcccaccttgcagaacgacaccgccgagctccaggtcccg
cgcaacgccggcctgggctacctggtgagcaccgtgcgcgccctggacagcgacttcggc
gagagcgggcgcctcacctacgagatcgtggacggcaacgatgaccacctgtttgagatc
gacccgtccagcggcgagatccgcacgctgcaccccttctgggaggacgtgacgcccgtc
gtggagctggtggtgaaggtgactgaccacggcaagcccactctctccgcggtggccaag
ctcatcatcaggtcggtgagcggctccctgcccgagggggtgccccgggtgaacggcgag
cagcaccactgggacatgtccctgccgctcatcgcgactctgagtaccatctccatcatc
ctcctggcggccatggtcaccatcgctgtcaagtgcaagcgagagaacaaggagatccgc
acttacaactgccgcatcgcggagtacagccacccgcagctgggcgggggcaaaggcaag
aagaagaagatcaacaaaaacgatatcatgctggtgcagagcgaagtcgaagagaggaac
gccgtgaacgtcatgaacgtggtgagcagtccctccctggccacctcccccatgtacttc
gactaccaaacccgcctgcccctcagctcgccccggtcggaggtgatgtatctcaaacca
gcctccaacaacctcgctgtccctcagggacacgcaggctgccacaccagcttcacagga
caagggactaactcgagcgagacccctgccactcggatgtccataattcagacagacaat
tttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtaattccacg
tttaaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggct
gacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgttaggaaggcactc
aagatgaaaactacttcagctaaaagccaaccgcttgaacaagaaccagaagagtgtgtt
aattgcacagatgaatgccgagtgcttggtcattctgacaggtgttggatgccacagttc
cctgcagccaatcaggctgaaaacgcagattatcgcacaaatctctttgtacccacagtt
gaagctaacgttgagactgagacttacgaaactgtgaatcccactgggaaaaagactttt
tgtacatttggaaaagacaagcgagagcacactattctcattgccaatgttaaaccttat
ttaaaagccaaacgtgccctgagccctctcctccaagaggtcccttccgcatcaagcagc
cctaccaaggcctgcatcgagccttgcacctcaacaaaaagctccctagagggttgtgaa
gcaaaacctggagccctggctgaggcaagcggtcagtacttgcccaatgacagtcagtat
ctgtcacccagtaagcaacagagagaccctcccttcgcaccctcggatcagatggcaagg
gtctttgcagatgtgcactccagagccagccgggattccagcgagatgggtgctgtcctg
gagcagcttgaccactccgggcgggatctgggcagagagtcggtggatgccgaggaagtt
gtgagagaaatcgataagcttttgcaagactgccgtgggaatgaccctgtggctgtgaga
aagtga
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