Cavia porcellus (domestic guinea pig): 100735321
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Entry
100735321 CDS
T07777
Symbol
Tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100735321 (Tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100735321 (Tnpo1)
03009 Ribosome biogenesis [BR:
cpoc03009
]
100735321 (Tnpo1)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100735321 (Tnpo1)
Ribosome biogenesis [BR:
cpoc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100735321 (Tnpo1)
Pre-60S particles
100735321 (Tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Arm
TPR_IPO5
Cnd1
HEAT_EF3_N
TPR_DNAAF5
HEAT_MROH2B_C
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
Ltn1_1st
INTS7_N
HEAT_GCN1_C_2
HEAT_Maestro
TPR_TTI1_C
Dopey_N
VPS15-like_hel
HEAT_DAAF5
ARM_TBCD
UNC45-central
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
100735321
NCBI-ProteinID:
XP_023423006
Ensembl:
ENSCPOG00000003540
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MAVCVSPDQLVIYGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICE
DSAEILDSDVLDRPLNIMIPKFLQFFKHNSPKIRSHAVACVNQFIISRTQALMMHIDSFI
ENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEAC
EFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRP
RFHRSRTVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPH
ILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSI
TCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVP
YLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLK
DEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPD
KDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKA
CFQHVKPFIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEI
INRPNAPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGI
CTMISVNPSGVIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFP
LPLKERLAAFYGV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctgtgtttctccagaccagctggtcatttatggtattttgattacaaccata
gcctccaagggagaattgcagaattggcctgacctcttaccgaaactctgtagccttttg
gattctgaagattataacacctgtgaaggagcatttggtgcccttcagaaaatatgtgaa
gattctgctgagattttagatagcgatgttttagatcgccctctcaacatcatgattccc
aaatttttacaattcttcaagcacaatagccccaaaataaggtctcatgctgtggcatgt
gtcaatcagtttatcatcagtaggactcaagccctgatgatgcacatcgattcttttatt
gagaatctctttgcattggctggtgatgaagaaccagaggtacggaaaaatgtgtgcaga
gcacttgtgatgttgcttgaagttcgaatggatcgcctgcttcctcacatgcataatata
gttgagtatatgctacagaggacccaagaccaggatgaaaatgtggctctggaagcctgt
gaattttggctcactttggctgagcagccaatatgcaaagatgtgcttgtgaggcatctt
cctaagttgattcctgtgttagtgaatggcatgaagtactcagatatagatattatcctg
cttaagggtgatgtggaggaggatgaaacaattcctgatagtgaacaagatataaggcca
cgatttcatcgatcaagaacagtggctcagcagcatgatgaagatggaattgaagaggaa
gatgatgacgatgatgaaattgatgatgatgatacaatttctgactggaatctaagaaaa
tgttctgctgctgccctagatgttctcgcaaatgtttatcgtgatgagcttctgccacat
attttaccccttctgaaagaattacttttccatcatgaatgggttgttaaagaatcgggc
atcttggttttaggagcaattgctgaaggttgcatgcagggtatgattccatacctgcct
gagctcattcctcacctcattcagtgcctctctgataaaaaggctcttgtgcgttctata
acatgctggactcttagtcggtatgcacattgggtagtcagccagccaccggacacgtac
ctaaagccattaatgacagagttgctgaagcgcatcctggatagcaacaagagagtacag
gaagctgcctgcagtgcctttgctaccctagaggaggaggcttgtacagaacttgttcct
tatcttgcgtatatacttgataccttggtcttcgcatttagtaaataccagcataagaac
ctgctcattctttatgatgccataggaacattagcagattcagtaggacatcatttaaac
aaaccagaatatattcagatgctaatgcctccactgatccagaaatggaacatgttaaag
gatgaagataaagatctcttccctttacttgagtgcctgtcttcagttgccacagccttg
cagtctggcttccttccatattgtgaacctgtgtatcagcgttgtgtaaacctagtacag
aagactcttgcacaagccatgttaaacaatgctcagccagatcaatatgaggctccagat
aaagattttatgatagtggctctcgatttgctcagcggcctggctgaaggacttggaggc
aacattgaacagctagtagctcgaagtaacatcctaacactgatgtatcagtgcatgcag
gataaaatgccagaagttcgacagagttcatttgccctgctaggtgacctgactaaagct
tgctttcagcatgtaaagccttttatagctgattttatgccaatattgggaaccaatcta
aatccagagttcatttcagtctgcaacaatgccacctgggcaattggagaaatttccatt
caaatgggtatagagatgcagccttatattcctatggtgttgcaccagcttgtagaaatc
ataaacagacccaacgcaccaaagacgttgttagagaatacagcaataacaattggtcgt
cttggttacgtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctgg
tgtacctccctgagaaacataagagacaatgaggaaaaagattcagcatttcgtgggatt
tgtaccatgatcagtgtgaatcccagtggcgtaatccaagattttatatttttttgtgat
gctgttgcatcatggattaacccaaaagatgatctcagagacatgttctgtaagatcctt
catggatttaaaaatcaagttggggatgaaaattggaggcgtttctctgaccagtttcct
cttcccttaaaagagcgtcttgcagctttttatggtgtttaa
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