Crocodylus porosus (Australian saltwater crocodile): 109310396
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Entry
109310396 CDS
T07440
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
109310396 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109310396 (CNGB1)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109310396 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
109310396
NCBI-ProteinID:
XP_019391027
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MLSWLEKVVPQPPETAHVPGEKDEKKEEPKVVTVEPQSAKVEQPPKRDTRAAEPPKSKGT
EGVEKKVEPAMTHEPGPAPASAAESTGGTVLSWLSQGLEKFVPQPAERLQSLGRSFETSL
DIIQQAEVPPVQELDVVIQEPPAPKPEEKEPQDSKELQSSSEQTFGSGVINWLVQGFEKM
VPQPEKKPEVCTQQPVVYQPANSCQEAKEKKPEETAKIEEPKLEPKLEPKPEPPPKESAS
ESLTTQEATAASQLGLGVSFFPWALGGDGSRMFDWFVQELEKMVPQPVIKQADSEGEVVT
ACPVEEICIFPEEQGETKLVIEDTESNEVLEEVKPCDTEMELKLSSAPLPSIEEETQEEE
ERVVCGDWYVCPSPEVPAAQRLQTSYFQNGSEEEETKTAKFLPHSCIIFNEDVGEHSFAV
AAPDSYHIEEEQVIEFSAAASDVCQLEHDQPLEFSVASDVCQLEHDQPLEFSVAPDVCQP
EDNQPIEFNDAPDVYQIEEEQVTEVKDPLIKVEEVQVEPELEPAGTDTEGPASITYPTVS
IKDADAQGEAPAEETSHPPLQLPSDNVSQMLTVPGRLGSSRKKHESHDDTLEQLTFTSPL
PSPSRDWQGSMPDHMGSPTSQSSAIINDRLQELVKLFKDRTEKVKEKLIDPDVSSEDESP
VASPAKKKPPEPLPPPPAELKSEAAKVEEEEHYCEMLCCKFKRRPWFDILKNYQFPSSID
PLTNLMYVLWLFFVVMAWNWNCWLIPVRCTFPYQTPDNIHYWLLMDYLCDLIYLLDILVF
QARLQFVRGGDIICDKKEMRENYMKTERFKMDLISLIPLDIFYLKVGVNSLLRLPRCLKY
MAFFEFNNRLEAILSKAYIYRVIRTTAYLLYCLHVNSCLYYWASAFEGLGSTHWVYDGEG
NSYIRCYYWAVKTLITIGGLPDPRTLFEIVFQLVNYFTGVFAFSVMIGQMRDVVGAATAG
QTYYRSCMDSTIKYMNFYRIPKVVQNRVKTWYEYTWQSQGMLDETELLVQLPEKMRLDIA
VDVNYAIVSKVALFQGCDRQMIFDMLKRLKSVVYLPHDYVCKKGEIGREMYIIQAGQVQV
LGGPDGKTVLVTLKPGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLSEILVHY
PDSEKLLRKKAKKMLKNNNKQKDEKGMSKETLIIPPRPGTPKLFQAALVAAGKMARKGKL
AHIRWKLKELKAMQEMQESASTPVPPKSPMHHRSPLASRRKSEEQQTEEVVTVTGDDSVS
FRMTPAPQSGEQILTVEVVEPEEKK
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgcttagctggcttgagaaggttgtgcctcagcctcctgagactgcccatgtcccagga
gaaaaggatgaaaaaaaagaggaacccaaggtagtgactgtggaaccccagtctgcaaag
gtggagcagccaccaaaaagagacaccagagcagcagaacctcccaaaagcaaaggcaca
gaaggcgtagagaagaaagtagaacctgccatgacccatgagccaggaccagcaccagca
tctgcagcagaaagcactggaggaactgtcctctcctggctgtctcaggggctggaaaag
tttgttcctcaaccagcagaaaggctgcagagccttgggaggagctttgagaccagtctg
gatatcattcagcaggctgaagtcccacctgtccaggaactggatgttgtcatacaagag
cctcctgcacccaaaccagaggaaaaggagcctcaagattctaaagagttgcaatccagc
tcagagcaaacgtttggaagtggagtcattaactggctggtgcagggttttgagaaaatg
gtacctcagccagagaaaaagcctgaggtctgtactcagcagcctgttgtatatcaacct
gcaaacagctgtcaggaagcaaaggaaaagaagcctgaggagactgccaaaatagaagaa
ccaaagctggagcctaaactggaaccgaagccggagcctccaccaaaagagagtgccagt
gaatctctaactacacaagaggcaactgcagctagccagctggggcttggagtctctttt
ttcccttgggctttaggtggtgatggtagcaggatgtttgactggtttgttcaggaactg
gagaagatggttccacagcctgtgatcaagcaggctgattcggaaggagaagtggtaact
gcgtgcccagtggaggagatttgtatcttccccgaggagcagggagagaccaaacttgtc
attgaagacactgaatccaatgaagttctagaagaggtgaaaccttgtgacactgagatg
gaacttaaactgtcttctgctcctctcccttcaatagaagaggaaactcaggaggaagaa
gagagggttgtctgtggtgactggtatgtgtgtccatccccagaggtacccgcagctcag
cggttgcagacatcctatttccagaatggtagcgaggaggaagaaaccaagactgcaaaa
tttctgcctcactcttgtattatttttaatgaggacgtgggtgagcattcttttgcagta
gctgctccagatagttaccatatagaagaagaacaagtgattgagttcagcgctgctgct
tcagatgtttgccagctagaacatgaccagccacttgagttcagtgttgcttcagatgtt
tgccagctagaacatgaccagccacttgagttcagtgttgctccagatgtttgccagcca
gaagataaccagccaattgagttcaatgatgctccagatgtttaccaaatagaagaagag
caagtgactgaggtcaaagacccattgataaaggtggaagaagtgcaagtagaacctgaa
ttggagcctgctggaacagatactgaagggccagcatcaattacctaccccactgtcagc
atcaaggatgcggacgcccaaggtgaggctccagcagaagagacaagtcaccctcctctg
cagctaccctctgataatgtatcccaaatgctcactgtacctggccggctaggatctagt
aggaagaagcacgaatcccatgatgacaccctggagcagctcacttttacctctccgctg
ccatccccatccagagactggcaaggaagtatgccagatcacatgggttcaccaaccagc
cagagcagtgcaatcatcaatgaccggctgcaggagctagtgaagctctttaaggacagg
actgaaaaagtgaaggagaagctgattgacccagatgtttcttctgaagatgaaagcccc
gtggcatcccctgccaagaaaaagcctccagaaccactacctccacctcctgctgaatta
aaatctgaagctgcaaaagttgaagaggaggagcattactgcgagatgctttgctgcaaa
ttcaaacgccgtccctggtttgacatcttgaagaattaccagttcccaagtagcatagac
cctctcaccaatctgatgtacgtgctgtggctgttctttgttgtaatggcctggaactgg
aactgctggctgattccagtccgttgtacctttccataccagacaccagataacatccat
tactggcttcttatggactatctctgtgacctcatctaccttctggacatccttgtcttt
caggcccgcctacagtttgtcagaggaggagacatcatttgtgataaaaaggaaatgaga
gaaaactacatgaaaactgaacgcttcaagatggacttgatctccctcattcctctggat
atattttacttaaaagttggcgtaaattccctcttacgtttgcctcgctgtttaaagtac
atggctttcttcgagtttaacaatcgacttgaagctattctgagcaaggcatatatttac
agagtgataaggaccacagcctatttactctactgcttacatgtgaactcttgtctatac
tattgggcatcggcatttgaagggctgggttctacacactgggtgtatgatggggaagga
aacagttatatccgctgttattactgggctgtcaagaccctgattaccattggaggcctc
ccagaccctcgaactctgtttgaaatagtcttccagcttgtgaactacttcacgggagtc
tttgccttctctgttatgataggtcagatgagagatgtagttggtgccgctacagcagga
caaacttattatcggagttgcatggacagtaccattaagtacatgaacttctacagaatt
cccaaagttgttcagaaccgggtcaaaacatggtatgaatacacatggcagtcacaaggc
atgctagatgaaaccgagctgttggtgcagttacctgaaaagatgaggctggatattgcc
gttgatgtgaactatgctatagtcagtaaggtggcgctcttccagggctgtgatcggcag
atgatttttgacatgctgaagaggctcaagtctgtcgtttacttacctcatgactacgta
tgtaagaagggggaaattggccgagagatgtacattatacaggctggacaggtgcaggtg
cttggaggacctgatggcaaaactgtgcttgtgacactgaaacctgggtcggtgtttgga
gaaatcagcttgctggcagtgggaggtggaaatcgccgcacagcaaatgttgtggctcat
ggattcgctaatcttttcattctggataagaaggacttgagcgaaattttggtgcattat
cctgactcagagaagcttctgcgtaaaaaagcaaagaaaatgctgaaaaacaacaataaa
cagaaagatgaaaaaggaatgtccaaagagacgctcatcattccaccaagacctgggaca
cctaaactcttccaagcagctctggtagctgcaggaaagatggcaaggaaaggaaagctt
gcccacatcaggtggaaactgaaagagttgaaagcaatgcaggaaatgcaggagtcggct
tccactccagttccaccaaaatcaccaatgcaccatcgatccccgttggcctcccgccgc
aagtcagaagaacaacaaactgaggaagttgtcactgtgacgggagatgattccgtctct
ttccgcatgactcctgccccacaaagtggggaacagattctcactgttgaggttgtagag
ccagaagaaaagaaatga
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