KEGG   Crocodylus porosus (Australian saltwater crocodile): 109312111
Entry
109312111         CDS       T07440                                 
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04510  Focal adhesion
cpoo04512  ECM-receptor interaction
cpoo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109312111 (COL9A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109312111 (COL9A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109312111 (COL9A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cpoo00535]
    109312111 (COL9A1)
Proteoglycans [BR:cpoo00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   109312111 (COL9A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 109312111
NCBI-ProteinID: XP_019393700
LinkDB
Position
Unknown
AA seq 881 aa
MKSNWQLPAFLYICSFLGSLVSATVQHQTRFPVTFASNQKTNLCPTIRIGQDDLPGYDLI
SQFQIDKAASRGVIQRVVGSTALQVAYKFGSNVDFRIPTRALYPNGLPDEYSFLTTFRMT
GSTLQKYWSIWQVQDSSGKEQVGVKLNGPAKSVEFSYTGLDGSLQTANFLHLPFLFDSQW
HKLMVSVEKTSVTLFIDCLKVESLNIKPKGKINTDGFAVLGKLNNNPKISVPFELQWMLI
HCDPLRPQRETCSELSSRTWVRSSHPDMYVEQHRPLEAALIQRIQGLTGPDGSFGPSGRK
GQKGEPGLPGARGLPGKGILGSAGPPGAAGLPGEVGRVGPPGDPGKRGLPGLPGPPGQRG
TIGLHDGDPLCPNACPPGRPGHAGLSGMKGHKGAKGEPGEPGRQGHKGEEGDQGILGDVG
TQGPPGPPGSRGMIGIMGPKGDKGARGLDGDPGPRGLPGAPGDQGQRGSLGELGPKGDRG
PSGPRGITGLPGPKGQPGLPGVDGREGIPGMPGAKGEPGKPGVPGDAGLQGLPGLPGFPG
AKGVSGPKGNRGPPGVPGLMGNSGKPGEQGIAGAVGPIGPRGPPGGRGDPGPAGPPGPPG
KRGSEGDIGLPGLPGPPGLHGVKGDRGTVGEPGPKGEQGTAGSEGEPGGRGDLGDMGLPG
PKGSAGNPGEPGSRGPEGSRGLPGMEGPRGSPGPRGMQGEQGVPGLPGSQGPAGREPTDQ
HIKQVCMRVMQEQLAQLAASLRRPEFGATGLPGRPGPPGAPGPAGENGFPGQLGPRGLPG
LKGPPGEIGRKGPKGDAGEKGDRGFPGRGPKGLPGTTGLPGEPGKPSYGREGRDGLRGPP
GIAGQPGVPGPPGPPGPPGYCEPSSCTVQAGQRAGKNVKGP
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgaaaagcaactggcaacttccagctttcttgtacatatgtagttttctggggtctttg
gtgtcagctaccgttcagcatcaaacaagatttccagtcacttttgcttctaaccaaaag
accaatctttgcccaacaatcaggattggccaagatgacttgccaggttatgacctgatt
tctcagttccagatagataaagctgcctcccgaggagttatccagagagtggtgggctcc
acagctttacaggtggcttataaatttggcagcaatgtcgacttcaggatcccaaccagg
gctttgtatcccaatggattgcctgacgaatattcctttctaactacttttcggatgact
ggaagcacacttcagaaatactggagtatttggcaggttcaggattcttcaggaaaagaa
caagttggagtgaagcttaatggtccagctaagagtgttgagttttcttatacgggactg
gatggaagtctccagactgcaaactttttgcatttgccttttctgtttgattcccaatgg
cacaagcttatggtcagcgtggagaagaccagtgtcactctttttattgactgccttaag
gtagaatccttaaacataaaaccaaagggcaaaatcaacactgatggctttgctgtgctg
ggaaaacttaacaataatcctaaaatttcagttccgtttgaactccaatggatgctgatt
cattgtgaccctctgcgaccacaaagagaaacgtgcagtgaactttcatcccggacctgg
gtaaggagctctcatcccgacatgtatgtggagcagcaccgaccgctggaagctgctttg
atccagaggatacaaggactaacaggacctgatggatcatttggcccatctggtcgaaaa
ggacaaaagggtgaacctggattacctggagctcgtgggcttccaggtaagggaattctt
ggatcagctggtccccctggtgcagcaggacttcctggtgaagttggccgcgttggtcca
cctggtgatcctgggaagagaggactaccaggcctaccaggaccaccaggccaaagggga
acaattgggctacatgatggagatccactgtgtcccaatgcttgtccacctggtcgtcca
ggacatgctggcctgtcaggaatgaagggtcataaaggtgcaaaaggagagcctggtgaa
ccaggaagacagggtcataagggtgaggaaggagaccaaggaatcctaggtgatgttgga
actcaaggccctccaggccctccaggttcaagaggtatgattggtataatgggaccaaaa
ggtgacaagggtgctcgtgggctggatggtgacccgggtccccgaggtctccctggtgca
cctggtgaccaaggacagagaggttctcttggagagttaggtccgaagggagacagaggc
ccttctggtccaagaggaataactggtctccctgggccaaaaggacaacctggcttgcca
ggagttgatggccgggaagggatccctggaatgcctggagcaaagggtgaaccaggtaaa
cctggcgttccaggggatgcaggacttcagggactgccaggtttacctggctttccaggt
gcaaaaggtgtttctggaccaaagggtaatagaggaccccctggagtaccaggtttgatg
ggaaattctggtaaacctggagaacaagggatagcaggggcagtgggaccaataggacca
aggggaccaccaggtggtagaggtgacccaggtcctgctggtcctccaggaccaccaggg
aaacggggctctgaaggggatataggacttccaggactccctggtcctccaggccttcac
ggtgttaaaggtgacaggggcacagttggtgagccaggtcctaaaggtgaacaaggtact
gctggatctgaaggagaaccaggaggaaggggtgacctgggtgatatgggactgccgggc
ccaaagggatctgctggtaaccctggagaacctggttctcgggggcctgaaggaagtcgt
ggattgcctggcatggaagggccacgtggatcacctggacctcgtggtatgcagggtgag
caaggtgttccgggtctgcctggcagccagggtccagccggtagagagcccacagatcag
cacatcaagcaggtttgcatgagagtcatgcaagaacaactggctcagctggcggccagt
cttaggaggcctgaatttggtgctacaggtcttccaggtagacctggaccacctggtgct
cctggacctgctggagaaaatggcttcccaggacagcttggacctcgtggtctaccaggt
ctcaaaggacctcctggtgagattggtcgcaaaggtccaaaaggtgatgctggtgaaaag
ggggacagaggatttcctggcagaggacccaaaggcttacctggaacaacaggccttcca
ggtgaaccaggcaaacccagctacggtagggaaggacgtgatgggctacgaggcccacca
ggtatagctggtcagcctggagttcctggtcctccaggtcctcctggtcctccaggatat
tgtgagccatcatcttgcacagtgcaggctggacagagagctggtaagaatgtgaaaggg
ccatga

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