Collimonas pratensis: CPter91_5475
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Entry
CPter91_5475 CDS
T04306
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpra03016
]
CPter91_5475 (gidA)
03036 Chromosome and associated proteins [BR:
cpra03036
]
CPter91_5475 (gidA)
Transfer RNA biogenesis [BR:
cpra03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CPter91_5475 (gidA)
Prokaryotic type
CPter91_5475 (gidA)
Chromosome and associated proteins [BR:
cpra03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CPter91_5475 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
DAO
HI0933_like
AlaDh_PNT_C
Pyr_redox
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AMP07758
UniProt:
A0A127QCH3
LinkDB
All DBs
Position
complement(5655246..5657168)
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AA seq
640 aa
AA seq
DB search
MLFPTHFDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLV
KEVDAMGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKQAIRSRLENQENLWL
FQQAVDDLLVEGDRVVGAVTQVGIQFRSRAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPA
ISLSARLKELKLPQGRLKTGTPPRIDGRTIDFSVMEPQPGDLDPVPVFSVMGNAAMHPQQ
LPCWITHTNQQTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEP
EGLTTNEFYPNGISTSLPFDVQLALVHSMRGLENAHILRPGYAIEYDYFDPRGLKASLET
KQIQGLYFAGQINGTTGYEEAAAQGMLAGLNAALQTQERDAWTPRRDEAYLGVLVDDLIT
QGVQEPYRMFTSRAEYRLSLREDNADLRLTEIGRQLGCVGDVQWAQFEKKREAVAVEMER
LRSTWVNPRIVAAAEAERLLGKPMEREYALVDLLRRPNVTYEQLMTLKGVDGQELGGPGV
EDDSVREQVEIQVKYAGYIDRQAREVERHEHNENLKLPADLDYMEVQALSIEVRQKLNLH
RPETFGQASRISGVTPAALSLLLVHLKKGMKRLNADDKAA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcttttccctacacattttgatgtaatcgtcgtcggtggcggtcacgccggcaccgaa
gccgcgctggcgtccgcccgcatgggccaaaaaacgctattgttgacccacaatatcgag
acactgggccagatgtcgtgcaacccgtcgattggtgggataggcaaaggccatcttgtg
aaagaagtcgatgccatgggcggtgcgatggccatcgctaccgatgaagcgggtatccag
ttccgtatcttgaattcttccaaaggcccggcagtccgcgcgactcgggcgcaagccgac
cgcattctgtacaagcaagccatccgttcacgcctggaaaaccaggaaaacctgtggctg
ttccagcaggcggtagatgatttgctggtggagggcgaccgcgtcgtcggcgccgtcacc
caggtcggcatccagtttcgcagcagggcagtggtgctgacggcaggtactttcctggac
gggaagatccacgtcggcctgaataactattcggctgggcgtgccggcgaccctccggcg
atttcactgtcggcgcgcctgaaggaattgaagctgccgcaagggcgcctcaagaccggt
acgccgccgcgtatcgatggccgcactatcgatttttccgtgatggagccgcaacccggt
gatctcgatccggtgccggtgttttcagtcatgggcaatgccgccatgcacccgcagcaa
ctgccatgctggattacccacaccaaccagcaaacgcacgatattatccgcgccggcctg
gaccgcagcccgatgtacaccggtgtcatcgaaggagtagggccgcgttactgcccatcg
atcgaggacaagatccatcgcttcgccagcaaggattcgcaccagatcttcctcgaaccg
gaaggcctgaccaccaacgagttttatcctaatggcatttcgacaagcctgccgttcgat
gtgcagctggcgctggtgcattcgatgcgcggtctggagaatgcgcatatcctgcgccct
ggctacgccatcgaatacgactacttcgatccgcgcggtttgaaggcttcgctggaaacc
aagcagatccagggcctgtactttgctgggcagatcaacggcaccaccggttacgaagaa
gccgctgcgcagggcatgctggctggtctcaatgccgccttgcaaacacaagagcgcgat
gcctggacaccacgccgcgatgaagcttatctcggcgtactggtcgacgatctgatcacc
caaggcgtgcaagaaccgtatcgcatgttcaccagccgtgccgaataccgtctcagcctg
cgcgaagacaatgccgacctgcgcctgaccgaaatcggccgccagcttggctgcgttggc
gatgtccaatgggcgcagtttgaaaagaagcgcgaagcggttgctgtcgagatggagcgc
ctgcgttccacgtgggtgaatccacgcatcgtcgccgctgccgaagccgaacgcttgctg
ggcaagccgatggaacgcgaatatgcattggtcgatctgctgcgccggccaaatgttact
tatgaacaattaatgacgctgaagggcgtcgacggccaggaactcggcggtccgggtgtg
gaggacgacagcgttagggaacaggtcgaaatccaggtcaagtacgccggctatatcgac
cgccaggcacgtgaagtcgagcgccacgagcacaatgaaaacctcaagctgccggccgat
ctcgactacatggaagtgcaagccctgtcgatcgaagtccggcagaagctcaacctgcac
cggcccgaaaccttcggccaggcttcacgcatttccggcgtcacgccggctgccttgtcg
ctgctgctggtgcatctgaaaaaaggcatgaagcgcctgaatgcagatgacaaggcagcc
tga
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