Colwellia psychrerythraea: CPS_4049
Help
Entry
CPS_4049 CDS
T00258
Name
(RefSeq) radical SAM domain protein
KO
K11779
FO synthase [EC:
2.5.1.147
4.3.1.32
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00680
Methane metabolism
cps01100
Metabolic pathways
cps01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
CPS_4049
Enzymes [BR:
cps01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.147 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase
CPS_4049
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.32 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
CPS_4049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AAZ28235
UniProt:
Q47WW5
LinkDB
All DBs
Position
complement(4258459..4259637)
Genome browser
AA seq
392 aa
AA seq
DB search
MDKLTAVQASQLGDVRGKALNTLRQAACAVRDQHWGKIMTYSRKVFIPLTNMCRDECQYC
TFVQRPESGNATIMTPEQVLTVIRQGQAMGCKEVLLSLGEKPELRYREAREALAEQGFST
MMEYVAEISALILRETSLLPHVNAGTMTADELANIKKVSASMGMMLETVSERLLQKGQAH
YACPDKVPATRLATIKSAGEQNIPYTTGILIGIGETWQERVESLEAINNLHLKYGHIQEV
IVQNFCAKSGTAMADHPEPDLEDMLRTLAVARLMLDPSISIQAPPNLQQRYKDYIGSGIN
DWGGISPLTKDFINPERAWPQIEQLAKATQDCGYQLQERLAVYPEYLKQQYLSPQISKRL
EGMARADGLASQQCVTAESAKHAADMIYHVAL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggataagttaacagcagtacaggccagccaactaggcgatgttcgcggcaaagcgttg
aatacgctccgacaagccgcctgtgctgtgcgtgatcaacattggggcaagatcatgacg
tattcaagaaaggtttttattcctctgaccaacatgtgccgcgatgagtgccaatactgc
accttcgttcagcgtccagaatccggtaatgcaaccatcatgacgccggagcaggtattg
accgtcattcgtcagggtcaggcaatgggctgcaaagaagtgttgttgagcctaggtgaa
aaacctgaactacgctatcgcgaagcaagagaagcactcgctgaacaaggtttttccacg
atgatggaatacgtagctgagatcagtgcactaatactgcgtgaaaccagcctgttacca
cacgttaatgccggtactatgaccgctgatgagttggcaaatattaaaaaagtcagcgct
agcatgggcatgatgcttgaaactgtcagtgaacgattattgcaaaaaggacaagcgcac
tacgcctgtccagacaaagttcccgctacacgtttggcaaccatcaaaagtgcgggcgag
cagaacattccttataccactggtattttgataggtattggtgaaacgtggcaggaacgt
gtagaaagtcttgaagccattaataatcttcacctcaaatatggtcacattcaggaagtt
atcgtgcagaatttttgtgccaaatccggcacggccatggctgaccatccagagcctgat
cttgaagatatgttgcggactttggccgtcgctcgtctaatgctcgatccgagtattagt
attcaggcaccaccaaatctacaacaacgctataaagattatatcggcagcggtattaat
gattggggtggaatttcgccgttaaccaaggactttatcaacccagaaagagcctggcct
caaattgagcaattagccaaggcgactcaggactgtggttatcagttacaagaacgccta
gctgtttaccctgaatatcttaaacaacaatatcttagcccacaaatctcaaagcgactc
gaaggtatggctcgcgccgacggtttagcctctcaacaatgtgttactgcagaatcggca
aagcatgccgctgatatgatctaccacgtggccctttaa
DBGET
integrated database retrieval system