Corynebacterium pseudotuberculosis 48252: CPTA_01917
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Entry
CPTA_01917 CDS
T03482
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cpse
Corynebacterium pseudotuberculosis 48252
Pathway
cpse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPTA_01917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpse03400
]
CPTA_01917
Enzymes [BR:
cpse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CPTA_01917
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPTA_01917
DNA repair and recombination proteins [BR:
cpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPTA_01917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
AIG07746
UniProt:
A0A1L6D141
LinkDB
All DBs
Position
complement(2020373..2021230)
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVEVVRRGLERHAVGRALTSVAVSHSRAARYVVGGPQELEARLRGRVLSSVHRRG
KFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQSELWFVDQRTFG
YWRIAELVYSHNRLVPKPMAHIAADLLEPAQDLMATARLIKTKHLEIKRLLLNQEIVAGI
GNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLNEGQRVMHNALLQGGTSFDSLYVNVNGE
SGYFDVSLQAYGQEGMPCTRCGTALVREKFSNRSSHFCPRCQRLQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagttgccagaggtagaggttgttcgccggggacttgaacgccatgccgttggg
agggcgttaacttctgtggcagtctcacattctcgtgctgcacgctatgtagtaggcggc
cctcaggagcttgaggcgcggctacgcggacgagtgctttcctcggtgcatcggcgcgga
aagtttttgtggtttgttttggatgactcttgtgcacttatggtgcatctgggtatgagt
gggcagatgcttattaagcaagctgatgcctcattgcatcctcatacccggattcgctgt
tctcttagttctggaagcgaacagagcgaattatggtttgtggatcagcgtacgtttggc
tattggagaatcgccgaattggtctattcccataatcgattagttcctaagccaatggcc
cacatagcagccgatctattggaacccgcgcaagatcttatggcgacagcgcgactgatt
aaaactaaacatttagagattaaaagactgcttcttaatcaagagattgttgcgggaatc
ggtaatatatacgcagatgagatgctgtggtctgcgcaaatacaccctaggcagaaggcg
cacaggctttcattacgtgcgattcactcgctcttaaacgaaggacaaagagtgatgcat
aatgctctgctgcaaggaggaacaagttttgattcgctgtatgtcaatgtgaatggcgaa
tctggctattttgatgtttctttgcaggcttatggccaagaaggaatgccttgcacgcga
tgcggtacagcgttggtgcgggaaaagttttccaatcgttcaagtcacttttgtccacga
tgccagcggctgcaatag
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