Corynebacterium pseudokroppenstedtii: Q0N40_09550
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Entry
Q0N40_09550 CDS
T10643
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cpsk Corynebacterium pseudokroppenstedtii
Pathway
cpsk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpsk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q0N40_09550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsk03021
]
Q0N40_09550
03400 DNA repair and recombination proteins [BR:
cpsk03400
]
Q0N40_09550
Enzymes [BR:
cpsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q0N40_09550
Transcription machinery [BR:
cpsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q0N40_09550
DNA repair and recombination proteins [BR:
cpsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q0N40_09550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WPF24760
UniProt:
A0AAU0PY47
LinkDB
All DBs
Position
complement(2222642..2226148)
Genome browser
AA seq
1168 aa
AA seq
DB search
MLEGPILAVSRQTSLTSGIPGATKRYSFAKIKEPIEVPGLLDLQRDSFAWLIGAPEWRAK
KQAESEEGARITSGLEDILEELSPIEDYSGNMSLTLSEPRFDDVKNTIDEAKDKDINYSA
PLYVTAEFTNAMSGEIKSQTVFIGDFPMMTDKGTFIINGTERVIVSQLVRSPGVYFDESI
DKSTERPLHSVKVIPSRGAWLEFDIDKRDTVGVRIDRKRRQPVTVLLKALGLSTQDITDR
FGFSELMMSTLEHDGVANTDEALLEIYRKQRPGESPTRDSAQALLDNSFFNPKRYDLAKV
GRYKVNRKLGLGGGSTTGEHTLTEEDILTTIEYLVRLHAGERTMESPDGTELMITTDDID
HFGNRRLRTVGELVQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFF
GTSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGLDVRDVHASHYGRMCPIETPEG
PNIGLIGSLASYARVNPFGFIETPYRRVENGQATDVVDYLTADEEDRHIVAQANTKMDSE
GRFVEDTVEVRMKGGNVEVVPASEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANM
QRQAVPLLRNEAPFVGTGMELRAAHDAGDVVIARRSGVVETVCADFITTLGDDGQRDTFL
LRKFERTNQGTCYNQKPLVEAGDRIEEGQALADGPGTENGEMALGRNLLVAFMPWEGHNY
EDAIILNQRIVEEDVLTSIHIEEHEIDARDTKLGPEEITRDIPNASEDILADLDERGIVR
IGADVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVR
VFSREDDDDLAPGVNQMVRVYVAQKRKIQDGDKLSGRHGNKGVVGKILPAEDMPFLPDGT
PVDIILNTHGVPRRMNIGQVLEVHLGMLAKSGWKVDPESQDPAVKAMLETLPEDLYDVPA
DSRVATPVFDGTTNEELSGLMRSSRPNRDGDQMVNEFGKSTLIDGRTGEPFQQPISVGYM
YMLKLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQEL
LTIKSDDVIGRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPVDLG
ADDDDLDQANASLGINLSRDERFDADAV
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcccgccagaccagtttaacgtccggaatcccc
ggcgcgacgaaacgctactcgttcgcgaagattaaagagccgatcgaggtccctggcctc
ctcgatctgcagcgcgactcgttcgcgtggcttattggcgcacccgaatggcgcgctaag
aagcaggctgagtccgaagaaggcgcgcgtattaccagcggcctggaggacattctagag
gagttgtctcccattgaggactactccggcaacatgtccctcaccctatccgagccccgc
ttcgacgacgtcaagaacacgatcgatgaagccaaggataaggacattaactactccgcc
ccgctctatgtgacggcggaattcaccaacgccatgtctggcgaaattaaaagccagacc
gtattcattggcgatttcccaatgatgacggacaaaggcacgttcatcatcaacggtacc
gagcgtgtcatcgtgtcccagttggttcgctcccctggcgtctacttcgacgagtccatc
gacaagtcgaccgagcgcccgctgcactccgtcaaggtcatcccttcccgcggtgcatgg
ttggagttcgacatcgacaagcgcgacaccgtcggcgttcgcatcgaccgtaaacgtcgt
cagcccgtcaccgtgctgttgaaggctttgggtttgtcgacgcaggacatcacggatcgt
ttcggtttctccgaactcatgatgtccaccctcgagcacgatggcgtcgctaataccgac
gaagctctcctggagatttaccgcaagcagcgcccgggtgaatcacccacgcgcgattcc
gctcaggctttgctggacaacagcttcttcaacccgaagcggtatgacctggcgaaggtt
ggccgctacaaggtgaaccgcaagctcggtttgggcggcggctccaccacgggcgagcac
acgctgaccgaagaagacatcctgaccaccattgagtacttggtgcgtctgcacgccggt
gagcggacgatggaatcgcccgacggcaccgagctgatgatcaccaccgacgatatcgac
cacttcggtaaccgacgcctccgcaccgtcggcgagctggtccagaaccaggttcgcgtc
ggcctgtcgcgtatggagcgtgttgtgcgtgagcgcatgaccacgcaggacgcggaatcc
atcacgccgacctcgctgatcaacgtgcgtcctgtgtcggcagcgatccgcgagttcttc
ggaacgtcgcagttgtcgcagttcatggaccagaacaactccctgtctggcctgactcac
aagcgtcgtctgtccgccctcggacctggcggtttgtctcgtgagcgcgcaggtctggac
gttcgtgacgtccacgcctcgcactacggccgcatgtgccccattgagacgcctgagggt
ccgaatattggtttgatcggctccctcgcgtcctacgcacgcgttaacccgttcgggttc
atcgagacgccgtaccgtcgcgtcgaaaatgggcaggctaccgacgttgtcgactacctc
accgctgatgaggaagaccggcacatcgtcgcccaggccaacacgaagatggactccgag
ggccgcttcgttgaggacaccgtcgaggtccgcatgaaaggcggaaacgtcgaggttgtc
ccggcgagcgaagtggactacatggatgtgtccccgcgccagatggtgtccgtggctacc
gccatgattccgttcctggagcacgacgacgccaaccgtgccctcatgggcgcgaacatg
cagcgccaggctgtgccgctgctgcgcaacgaagcgccgttcgtcggcaccggtatggaa
ctgcgcgccgcccacgacgccggcgacgttgtgatcgcccgccgttcgggtgtcgtcgaa
accgtgtgtgcagacttcatcaccacccttggcgacgacggccagcgcgacaccttcctg
ctgcgcaagttcgagcgcaccaaccaggggacctgctacaaccagaagcccctcgttgag
gccggcgaccgcatcgaagagggacaagccctcgccgacggccccggcaccgagaacggt
gaaatggccctcggccgtaacctcctcgtggcgttcatgccatgggaaggccacaactac
gaggacgccatcatcctcaaccagcggattgtcgaggaagatgtcctcacctcaatccac
attgaggaacacgaaatcgacgcccgcgacaccaagctcgggccagaggaaatcacccgc
gatatcccgaacgcatcggaagatatcctcgctgacctcgacgaacgcggcattgtccgc
atcggtgccgacgttcgcgacggcgatatcctcgtcggtaaggtcaccccgaagggtgaa
accgagctgacgccggaagagcgcctcctccgcgcgatcttcggcgagaaggcccgcgaa
gttcgcgacacctccatgaaggttccgcacggtgaaacaggcaaggtcatcggcgttcgc
gtgttctcccgcgaagacgacgacgacctcgcgcccggtgttaaccagatggttcgcgtg
tacgtcgcccagaagcgcaagatccaggatggagataagctctccggccgccacggcaac
aagggtgtagtcggcaagatcttgcctgctgaggacatgccgttcctgcctgacggaacg
ccggtcgacatcattctgaacacgcacggtgtgccgcgtcgtatgaacattggacaggtg
ctggaagttcacctcggtatgctcgcgaaatctggatggaaggtcgaccccgagtcccaa
gaccccgcggtcaaggccatgctggaaacgcttcccgaggacctctacgacgtccccgcc
gattctcgcgttgccaccccggtgttcgacggcacgaccaacgaagagctgtccggactg
atgcgctcctcgcggcccaaccgcgacggcgaccaaatggtcaacgaattcggcaagtcc
accctgatcgacggccggacgggcgagcccttccagcagccgatctccgtgggctacatg
tacatgctgaaactgcaccacctggtcgacgagaagatccacgcgcgctccaccggcccg
tactccatgatcacccagcagccgctcggtggtaaggcacagttcggtggtcagcgcttc
ggtgagatggaagtgtgggccatgcaggcctacggtgccgcctacacgctgcaggaactc
ctgaccatcaaatccgacgacgtcatcggccgtgtcaaggtgtacgaagccatcgtgaag
ggcgacaacatccccgacccgggaattccggagtccttcaaggtgttgctcaaagagctg
cagtctctgtgcctcaacgttgaggtcctctccgccgacggaaccccggttgacctgggt
gccgacgatgacgatctcgaccaagccaacgcatccttgggtattaacctctcccgcgac
gagcgcttcgacgctgacgcggtgtag
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