Chiloscyllium punctatum (brownbanded bambooshark): 140453688
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Entry
140453688 CDS
T11285
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04510
Focal adhesion
cpun04512
ECM-receptor interaction
cpun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140453688 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140453688 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
140453688 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpun00535
]
140453688 (col9a2)
Proteoglycans [BR:
cpun00535
]
Extracellular matrix (ECM) proteoglycans
Others
140453688 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
140453688
NCBI-ProteinID:
XP_072404725
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Position
27:complement(49706035..49919529)
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AA seq
690 aa
AA seq
DB search
MASLTSIWRRPGVLRLVLLLQIISLCLTQGPFDEQRVVGSPGPAGVPGSDGIDGERGPPG
PPGPAGAKGDPGEPGPDGPQGDPGYDGLEGPKGEPGIPGRPGPKGQVGFPGLPGPPGAGT
MGPRGPAGPVGLPGEIGRPGAKGAAGQIGAIGRPGPPGQQGLPGNLHGAEGSADLLCPTS
CPPGLKGPQGLQGLKGHKGKPGLMGEPGRQGPPGIKGGIGISGEQGIPGQPGPQGLRGYP
GMMGGKGESGSRGYKGMVGPPGRMGLQGKQGPEGPLGDFGEKGDRGVRGQRGRQGLTGLK
GQNGLPGIDGKDGTPGVPGMKGDAGRPGIPGPAGPQGGAGLPGQPGQKGAAGSKGERGTQ
GMFGPTGPPGQMGEPGPEGEIGPPGPMGLKGDRGMSGETGPPGPRGKAGIKGERGPTGIP
GPQGVPGFKGDKGFQGKSGPKGGVGDPGVEGLDGENGEKGDSGEPGVKGEQGVMGEPGYR
GPIGNPGEPGAEGRVGLPGPRGPNGERGVTGSTGRQGIAGRDAGDQHIVEVVLKMMQEQL
AAVAVSAKRAVLGGAGMTGPPGPPGKPGFSGEQGDHGIPGPRGLPGLPGVQGQIGNTGPK
GKQGEKGDRGEKGHGYPGLPGPPGITGPPGMPGRSISGRDGEQGVPGVSGQPGRPGLPGP
PGIPGFCEAAACLGASAYLASGGGPDYKGP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctagcctgaccagtatctggcggcgccctggagtcctgcggcttgtactcttgctg
caaatcatcagcttgtgcttgacccagggtccgttcgatgagcagcgtgtagttggatcc
ccgggcccagccggggttcctggatcagacggcatcgatggggaacgtggacctcctggg
ccccctggtccagctggagcaaagggtgatcctggtgaacctggaccagatggacctcaa
ggtgacccgggatatgatggtctggaaggtccaaagggtgaaccagggatacctggaagg
ccaggtcccaaaggtcaggtgggcttccctgggcttcctggaccaccaggggctggaacc
atgggaccacgtggtcctgctggtccggttggtcttcctggagaaattggccgtcctgga
gctaaaggtgcagcaggacagattggagcaattggccgtccaggaccaccaggtcaacag
gggcttcctggtaaccttcacggtgcagaggggagtgcggacctcctgtgcccaacctct
tgccctccaggactgaaaggcccacagggacttcagggtctcaagggacacaaaggcaaa
ccaggactgatgggagaacctggcagacagggacccccaggcattaaaggtggcattggc
atctcaggagaacaaggcattccaggccaaccaggccctcagggtcttcgaggataccct
ggtatgatgggaggaaaaggcgaaagtggttctcgtggttacaagggcatggtgggtcca
cctggacgaatgggccttcagggtaaacaaggtcctgaggggccacttggagattttggt
gagaaaggagatcggggtgtacgagggcaaagaggacgccaaggtctaactggactgaag
ggtcaaaatggtttaccgggcatcgatggcaaggacggcacgcctggggttcctggtatg
aagggagatgcaggacgacctggaattccaggaccagcgggtccccagggaggagctggt
ttacctggacaacctggtcagaagggagctgctggttcaaagggtgaaagaggtactcaa
ggaatgtttggtcccactggccctccaggtcaaatgggtgagcctggacctgaaggagag
attggcccaccaggacccatgggtctaaagggcgacagaggaatgtccggtgaaacagga
cctccaggacccagaggcaaggctggtattaaaggagaacggggtcccactggaatccca
ggtcctcagggtgttcctggatttaaaggtgataagggattccaaggaaagtcaggaccc
aaaggtggtgttggcgacccaggggtggagggactggatggtgagaatggtgaaaaggga
gactcaggggagcctggagtgaagggagagcaaggtgttatgggggagccagggtacagg
ggcccaattggtaacccaggagagccaggagcagaaggtcgagtaggtttgccaggccct
cgaggtcccaatggagagcgtggtgttaccggatcgactggccgacaggggatcgctgga
cgtgatgcaggagatcagcatattgttgaagttgtcttgaaaatgatgcaagaacaatta
gccgcagtcgcagtcagtgccaaacgagcagtactgggaggagcagggatgactgggccc
cctggaccccctggaaagccaggcttttctggtgaacaaggggaccatgggattcctggg
cctcgcggcttacctggtctgccaggtgttcaaggccagatcggaaataccgggcccaaa
ggaaaacaaggagagaagggcgatcgaggtgagaaaggtcatggatatccaggtctcccc
ggtccaccaggcattacaggacccccaggaatgcctggacggagtataagtggtagggat
ggtgaacagggagtgcctggtgtgtcaggacagcctggccgccctggtttgcctggaccc
cctggtatccccggattctgtgaggctgccgcttgcttaggggcctctgcatacctggcc
tctggtggtgggccggactacaaggggccttga
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