Chiloscyllium punctatum (brownbanded bambooshark): 140458134
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Entry
140458134 CDS
T11285
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140458134 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140458134 (dcp1b)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140458134 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
140458134 (dcp1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
DUF1589
SASP_gamma
Motif
Other DBs
NCBI-GeneID:
140458134
NCBI-ProteinID:
XP_072408346
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Position
32:46089914..46180345
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AA seq
613 aa
AA seq
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MAAVPGSRGLDISLAALQRQDPYIFRIVDVASQVALYTFSQRDNEWEKTDVEGTLFVYAR
SASPRHGFTIMNRLNVENRTEPITKDLDFQLQDPFLLYRNAQLSIYGIWFYDEVECQRIA
ELMKNLTQLEQLKAQQEVGSPISNQNEAVDIVQMLFKAEHEYNKVKLSSEPKQMTSSNLI
RNSSNLIKPIPIKLTEFGTDTHYQQVQQQNKSTELGTKHLNLAVLFGTQEKSTLTNVPNE
TKEFKSKASSRPAVVRSLSYEEPRKLLELETSQSVKKQFCPAIQKLMSRGVDLHPVSELP
ENHSCENQSEKSMEESLAGLFQSQSSTRSISLQQTRLDKSSSLFPKGTHKLLQKLHCTQA
SISTSCPTVIHSDLLFSRTPNGSQMQPVSQSQSAYLSSTLQVQPEMHHVPTIDKSKSTIA
SNSCTNQIQASSIIPPHELFQKLQIVQQDQQHHAGKMTLAAKFSAQPPPLVNQSDSAMKH
FDSQTEKFISSEKPNLLIQAISPQRIPATVIPSLLMSPTVFTQSSVGKPMMRVEASAILL
PQTDTIMAPKQLHSGLHSSAQMAELTNKKPHALTKTQFQETLLYLLQNDPNFVNTIYEAY
LTSQSNTSAEKKT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtaccggggagcagaggactggatattagcctcgcagccttacaaaggcag
gatccgtatatttttcgtattgtggatgtggctagtcaggtagcgctatacaccttcagt
cagagagacaatgaatgggagaagactgacgtcgaagggaccttatttgtttatgcaaga
tctgcttctccaaggcatggctttaccatcatgaacagacttaatgtggagaacaggact
gaaccaattaccaaggatttggactttcagttacaagacccttttctactctatagaaat
gcacagttgtcaatctatgggatctggttctatgatgaggtggaatgtcaaagaattgca
gaacttatgaagaatttaactcagctggagcagttgaaggcacaacaagaagttggatca
ccaatctctaaccaaaatgaagcagtggacattgttcagatgctgttcaaggctgaacac
gaatataacaaggttaagctgtcttctgagccaaaacagatgaccagttccaatctgatt
cgcaatagttcaaatttgatcaagccaattccaattaaattgactgagtttggaacagac
actcattaccaacaagtacagcaacagaacaagagcacagaattgggaacaaagcatttg
aatttggcggtcttgtttggaacacaagaaaaatctactttaactaatgtgccaaatgaa
acaaaggaattcaagagtaaagcttccagtcgaccagctgttgtacgttctctgtcttat
gaggaacccagaaaactgctcgagcttgaaacttcccaaagtgtcaaaaagcagttttgt
cctgctattcagaaactaatgagtcgtggagttgacctgcatccagtatctgagttacca
gaaaatcattcttgtgaaaaccaaagtgaaaaaagtatggaagaatcattagcaggactg
ttccaatctcaatcctcaacgcgaagtatctctctgcagcaaactcgcttggataaatcc
agttccttattccctaaaggtactcacaagttgcttcagaaactacattgtacccaagca
tcaatttccacatcatgtcctactgttatacactctgacctcctcttcagcagaactccg
aatggttcccagatgcagcctgtttcacagtctcagtctgcctatcttagctccacccta
caagtgcaacctgaaatgcaccatgttccaacaatagacaagtccaagagcactattgcc
tcaaatagttgtactaatcaaatacaagcctccagtatcataccccctcatgaattgttt
cagaagctgcagatagttcagcaggatcagcaacatcatgctggaaaaatgactcttgca
gctaagttttcagctcagccgccaccattagtcaatcagtctgattctgcaatgaaacat
tttgattctcaaactgaaaaatttatcagttcagaaaaaccaaacctacttattcaggca
atctccccacagcgcattccagctacagttataccatctctgttgatgtcgccgacagtg
ttcacccagtcttcagtgggaaagccaatgatgagagtagaagcaagtgccatactttta
ccacagacagataccattatggctcctaaacagttacacagtggtttgcattcatctgca
cagatggcagagctgactaataaaaaaccacatgcgcttaccaagactcagttccaggaa
actcttttgtatcttttgcagaatgatcccaactttgtgaataccatttatgaagcttat
ctcacaagccaatcaaacacctcagcagagaagaaaacttga
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