Chiloscyllium punctatum (brownbanded bambooshark): 140458238
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Entry
140458238 CDS
T11285
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04514
Cell adhesion molecule (CAM) interaction
cpun04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
140458238 (cntn1b)
04517 IgSF CAM signaling
140458238 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140458238 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpun00537
]
140458238 (cntn1b)
Cell adhesion molecules [BR:
cpun04515
]
Immunoglobulin superfamily
Contactins
140458238 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpun00537
]
Others
140458238 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Ig_4
Pur_ac_phosph_N
Sp38
Zwei_Ig_N
Ig_C17orf99
V-set_CD47
C2-set_2
Fn3_VIN3
Ig_Rha78A_N
Interfer-bind
NDNF
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
140458238
NCBI-ProteinID:
XP_072408659
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All DBs
Position
32:64951553..65701847
Genome browser
AA seq
1013 aa
AA seq
DB search
MWFLLSHFFALSFICCLAEDSRQHGPVFEEQPLPTIYPKESEEAKVSLNCRVRANPPPTY
RWKLNNRDINVDDTRYNMIGGNLVINNPEEVKDRGKYQCLATNKYGTIISKEANLQFGYL
ERFPTEERQAVEVNLGVGVMLLCAAPPHFPDDLTYRWLLNEFPRFIMSGRRRFVSQTTGN
LYIAKVEESDMGNYSCIVTSPSISKSVFSKYIPLIPQTAGVVKRYPADIKVRFTDTQVLM
GQNLTLECFALGNPIPQIRWWKQEGSLPSSAELLTYNSVLRLTNIQPEDEGTYVCEAENS
KATDRVEGWLTVHAHPYWIRSINDTMQDIGSDFTWHCEAGGKPQPTYKWLRNGEVIHGAR
FRVNRGDLRISRLTLQDSGMYQCVTENKYGSLYSNAELKVLASGPDFRLNPVKKKLLGAR
GGKVLMDCKPKAAPKPTFMWSKGTELIKNNSRMSIWFNGTLEIRDLSKADEGVYTCFAEN
NRGKANSSGTLTVTEPTRITLEPSNIDITVGENGTMECHASHDPILDLSLVWSTNGYTID
FEKEKDYMERRIENRNSGELFFKNAQLRHTGKYTCTAKTTVDSASASADLIVRGPPGPPG
GVRVENIGDTFVTLTWSRGTDNHSPISKYTIRQKFFDSDEWKDAKTDPQDIEGNMETAKV
IDLIPWMDYEFSVVATNTLGLGEPSLPSAKIRTAEAAPTVAPSDVGGGGGNHRELTVTWT
PLPREYHYGSSFGYIVAFKPSTSKEWRKVTVPNPEGSRYVHKDDSLSPRTPFEVKVKAFN
SKGNGPFSLSALIYSAEDEPSEAPSQVTARSLSSSEIEVIWSPVSEPSVEGYEIRYRRDI
DTEAAAQRVRTIGTNTTARIRDLKPHTRYYVEVRAYNKAGVGPSSQQIAITTRKAPPSKP
PKIIDTAMVGTYFKISWEAVTPLDNESNVEGYKVLYRRAGTVNSTLLQTVRQNIDIPIHD
EGDYIVEIRAYGEGGDGAVNSVKISKGSGVNVQVSYVLLSFGLIFGAISCLEL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcctgttgagtcatttttttgcattgtcattcatttgctgcttggcagaagac
agtaggcaacatggaccagtgtttgaagagcaaccactacctacaatctacccaaaagag
tccgaggaggcaaaagtgtctctaaactgtcgggttcgggcaaatccccctccaacttac
aggtggaaactaaataaccgagacattaatgtggatgatactcgttacaatatgattggt
ggtaacctcgttattaacaacccagaagaagtcaaggaccgtggcaagtaccagtgtctc
gcaacaaacaagtacgggaccattatcagcaaagaagccaacctgcaatttggatacctg
gagcgatttccaacagaggagcgccaagctgtggaagtgaatttaggagttggggtcatg
ctcctttgtgctgcccctccccattttccagatgacctcacctaccggtggcttctgaat
gaattccccagattcatcatgtctggcagacgccgttttgtctcccagaccaccgggaat
ctgtacattgcgaaggtggaagagagtgacatgggcaactactcctgcattgtcaccagc
ccgtccatttccaaaagtgttttcagcaagtacatccccctcatccctcagacagccggt
gtggtgaaaagatatcctgctgacatcaaagtcaggttcaccgacacccaagtcctgatg
ggtcagaacctcaccctggaatgcttcgcacttggaaacccaattcctcagatccgttgg
tggaagcaggagggaagtttgccaagcagtgctgagctgcttacctacaactcggtgcta
agactaaccaacatccagcctgaggatgaaggcacttacgtgtgtgaagcagagaactct
aaagcaacagatcgggttgagggatggctcactgtacacgctcatccgtactggattagg
tcgatcaatgacaccatgcaagatatcgggagtgacttcacctggcattgtgaagcagga
ggcaaaccgcagcccacttacaaatggcttcgtaatggagaggtcatccatggggcccgg
tttcgagtgaatcgaggggacctgcggatttcccgactgactttgcaagattccggaatg
taccaatgtgtgacagagaacaagtatggatccctgtactccaacgcggagctgaaggtt
ctggcttcaggcccagacttcaggttgaacccagtgaagaagaaactgctgggggccagg
ggaggcaaggtgttgatggattgcaaacccaaggccgctcccaagccaaccttcatgtgg
agtaaaggcaccgagctcatcaagaataattccaggatgtccatttggttcaatggcact
ttggagattcgggatctgtctaaggccgatgagggagtctatacctgttttgcagagaac
aacaggggaaaggctaacagcagtggcactttaacagtgaccgaacccaccagaatcact
cttgagccatcaaacattgatattaccgtaggggaaaatggcacgatggagtgccatgca
tctcatgaccccatcctggacctgtcattagtctggtcaacaaatggttataccattgac
tttgagaaagagaaagactacatggaacgcaggatagagaatagaaacagtggagaattg
ttctttaaaaacgcgcagctaaggcacactgggaaatacacctgtactgctaagaccacc
gtcgacagtgcgtccgcatccgcagacctgattgtcagaggtcccccgggaccccctgga
ggggtgcgagttgagaatattggagacacctttgtgaccttgacctggagtagagggact
gacaaccacagcccgatctcgaagtacaccatccggcagaaatttttcgattctgatgaa
tggaaagatgccaaaacagatcctcaggatatagaaggcaacatggaaacagcaaaggtg
atcgatttgatcccatggatggattatgaattcagcgttgtagcaaccaataccctaggc
ttgggagagcccagtttgccatctgctaaaatccggacagctgaagcagctccgaccgtg
gctccatctgatgttggaggaggtggcgggaaccaccgggaactgacagtgacgtggacg
cctctgccaagggagtaccattacggaagcagctttggttacattgttgccttcaagcca
agtacatcgaaggaatggaggaaagtcacagtccccaaccctgaaggcagcagatatgtt
cacaaagatgactctctatctccacgcactccatttgaagtcaaggtcaaagcttttaac
agcaaaggaaatgggccgtttagcctgtctgctttgatatattcagcagaggatgagccg
agtgaagctccttcacaagtgactgccaggagtctctcatcttctgaaatcgaagtgata
tggtcaccagtatccgaaccatcagttgaaggctacgagatcaggtaccgaagggacatt
gacaccgaggctgctgctcagcgagtaagaacaatcggaactaacaccacagccagaatc
cgagatcttaaaccccacacacgttactatgtagaagtcagggcctacaacaaagcagga
gttggaccttcgagtcaacaaattgcaatcacgacaaggaaagcacctcccagtaaacct
ccaaaaataatcgacaccgcgatggttggtacctatttcaagatttcctgggaagcagtc
acacctttggacaatgagtcgaatgtggagggctacaaggtgctttacagaagagctggc
acagtgaacagtacgctgttacaaacagtccgacaaaacatagatataccaattcacgat
gagggagactacattgtggaaatacgggcgtacggtgaaggaggagatggagcagtgaat
tcggtcaaaatttctaaaggttcaggagtcaatgtgcaggtctcctacgtcttgcttagt
ttcggcctgatctttggtgccatcagttgcctggagctgtga
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