Chiloscyllium punctatum (brownbanded bambooshark): 140462812
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Entry
140462812 CDS
T11285
Name
(RefSeq) elongation factor 1-alpha 2
KO
K03231
elongation factor 1-alpha
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140462812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140462812
03016 Transfer RNA biogenesis [BR:
cpun03016
]
140462812
03012 Translation factors [BR:
cpun03012
]
140462812
04131 Membrane trafficking [BR:
cpun04131
]
140462812
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpun04147
]
140462812
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
140462812
Transfer RNA biogenesis [BR:
cpun03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
140462812
Translation factors [BR:
cpun03012
]
Eukaryotic type
Elongation factors
140462812
Membrane trafficking [BR:
cpun04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
140462812
Exosome [BR:
cpun04147
]
Exosomal proteins
Proteins found in most exosomes
140462812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
140462812
NCBI-ProteinID:
XP_072412238
LinkDB
All DBs
Position
37:3795723..3834737
Genome browser
AA seq
464 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETPKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSEKRYDEIVKEVSAYIKK
IGYNPITVPFVPVSGWHGDNMLEASPNMPWFKGWKVERKEGNANGVTLLEALDTILPPTR
PITKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNITTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDVRRGNVCGDSKNDPPTEACNFTAQVIILNHPGQISAGYSPV
IDCHTAHIACKFAELKEKIDRRSGKKLEDNPKTLKSGDAAIVEMSPGKPMCVESFSKYPP
LGRFAVRDMRQTVAVGVIKNVEKKAVTAGKITKSAQKAQKAQGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagagaagattcacatcaacattgtggtcatcggtcatgtcgattccggcaaa
tccaccaccaccggacacctcatctacaaatgtggcggcatcgacaagagaaccatcgaa
aaattcgagaaggaggcggcagagatgggtaaaggttccttcaaatacgcctgggtcctg
gacaagctgaaagctgaacgtgagcgaggcatcactattgacatctctctgtggaagttt
gagacaccaaagtattacatcaccatcattgatgctcctggccacagggacttcattaag
aacatgatcactggaacctctcaggctgactgcgctgtgctgatagtggctgctggtgtt
ggtgaatttgaagctggcatctccaagaacggccagacccgtgagcacgcactcctggcc
tacactctcggagtgaagcagctcatcgtgggggtcaacaaaatggactccaccgagcct
ccgtacagtgagaagcgctacgatgaaattgtgaaggaagttagcgcctacattaaaaag
attggctacaacccaatcactgtcccctttgtgccagtgtccggttggcatggtgataac
atgttggaggcctcacccaatatgccatggttcaaaggttggaaggtcgaacgcaaggag
ggcaatgccaatggggtgaccctgctcgaagccctggacacgattctgcccccaacccgt
cccatcaccaaacccctgcgcctaccccttcaggacgtttacaagattggaggtattggt
acagtccctgttgggcgtgtggagactggggtgctgaaaccgggcatggtggtaaccttt
gcccccgtcaacatcacgacagaggtgaagtcggtggagatgcaccatgaagccttgtct
gaggctctgcccggggacaatgtgggcttcaacgtgaagaatgtgtccgtcaaggatgtt
cgccgtggcaacgtgtgtggagacagcaagaatgacccacccacagaagcctgcaacttc
actgcccaggtgattatcctgaaccaccctgggcagatcagtgctggctactccccggtc
attgactgccacaccgcacacattgcctgcaagtttgctgagctcaaggaaaagattgac
cgtcgttctggcaagaaattggaggacaatcccaaaaccctgaagtctggtgatgctgca
attgtggagatgtctcccgggaagcccatgtgcgtggagagcttttccaagtaccctcct
ctggggcgtttcgctgtgcgtgacatgaggcagacggttgccgtgggtgtcatcaagaac
gttgagaaaaaagcggtcactgctggcaagatcacaaagtctgcacagaaggctcagaaa
gctcagggcaaatga
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