Chiloscyllium punctatum (brownbanded bambooshark): 140482281
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Entry
140482281 CDS
T11285
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpun04040
]
140482281 (scn1laa)
Ion channels [BR:
cpun04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
140482281 (scn1laa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
140482281
NCBI-ProteinID:
XP_072435592
LinkDB
All DBs
Position
10:72793487..72986499
Genome browser
AA seq
2003 aa
AA seq
DB search
MAQPLLAPPGPDSLRLFTRESLANIERCIAEEKAKKPKDQHGDDNENGPKPNRDLEAGKT
LPYIYGDIPPGMVSEPMEDVDPFYSTQKTFIVLNKGKAIFRFSATPALYILSPFNPLRKL
AIKILVHSLFSMLIMCTIMTNCVFMTLYNPPDWTKNVEYTFTGIYTFESLIKILARGFCI
DNFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCVRWPPPASYFIPTNRSLSLNDTM
TNETEFIFNYEEYIEDDRNQYFLEDAKDALLCGNGSDAGQCPTGYLCLKAGRNPNYGYTS
FDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAM
AYDEQNQATLEEAEQKEAEFQQMLEQLKRHQEEAQAAAAAAEAGDENGRIGLCEMSHSSS
DASKLSSKSAKERRNRRKKRRQTELDAEERDKDERIHKSESEDNGRKGNGFRFSIDRNCL
SYEKKNSSPHQSLLSIRGSIFSPRRNSRSSIFSFKGRTKDVGSENDFADDEHSTFEDNES
RRGSLFIPRRQGERRSSNISQTSRSSRMLPVFPVNGKMHSTVDCNGVVSLAGGPSTPTSP
IGRLLPEVIIDKPATDDNGTNTETDLKKRRSGSHQFSMDFLEDPMQRQRALSVASILTNT
MEELEESRQKCPPCWYKFANTFLIWDCHPNWLKIKEIVHLIVMDPFVDLAITICIVLNTA
FMAMEHYPMTKSFEDVLTYGNLVFTGIFTGEMIFKIIALDPYYYFQEGWNIFDGIIVSLS
LMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFI
FAVVGMQLFGKNYKECVCKIDKNCVLPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVS
GQSLCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQKGI
DYVKRNMRELIHRVFIRRKVTEDIKPLDDLHSKKDIYISDHAAVEITKDIDYHKDGNCTT
CGIGSSMGKYNTDENDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFTSESDLEGSKEKL
AESSSSEGSTVDRTPPGEGEQPEEIPEESMEPEACFTEGCVQKFPFCYVNIQEGRGKSWW
NLRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYIEQKHNVKSMLEYADKIFTYIFIL
EMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLIANTLGYSELGAIKSLRTLRALRPLR
ALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGRYYHCINITDGKQF
SIKIVDNESDCEQLNETARWKNVKINFDNVGAGYLALLQVATFKGWTDIMYAAVDSRGVK
QQPDYEHSLYMYFYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKIQGMVFDFVTQQAFDITIMILICLNMVTMMVETDNQSNK
MDDVLYWINMVFIVLFTSECVLKLIALRYYYFTIGWNTFDFVVVILSIVGMFLAEIIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPTKDNP
GSPIKGDCGNPSVAILFFVSYIIISFLIVINMYIAIILENFSVATEESAEPLSEDDFEMF
YEVWEKFDSDATQFMEYGRLHDFADALEPPLRVAKPNRIQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGEGGEMDALRQQMEERFMASNPSKISYEPITTTLRRKQEHVSATIIQRAFRR
YLIRRTLKQASFMFKEKGKTSELLPGKEEMVIDKFNEISTTDKTDMTPSTTSPPSYDSVT
KPEKAREEKEKEDRGKDVRDYKK
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccactgcttgcaccaccaggaccagacagcctccgtctttttacccgagaa
tctcttgcaaatattgagagatgcattgcagaggaaaaagccaagaaacccaaggaccaa
catggggatgacaatgaaaatggcccaaaaccaaatcgtgatttggaagccggtaaaaca
ttaccatatatttatggtgacatacctccagggatggtgtctgagccaatggaagacgtg
gacccattttacagcacacaaaaaacctttatagtattgaacaaagggaaggcaatcttc
cgatttagtgccacacctgccttgtacattttaagtcctttcaatccattaaggaaatta
gctattaagattttggtacattcattgttcagcatgcttatcatgtgcactattatgacc
aattgtgtgtttatgaccctgtataatcctccagactggacgaagaatgtagagtacacc
ttcactggtatttacacatttgaatcgcttataaaaattcttgcaaggggcttctgtata
gataatttcacttttctccgtgatccgtggaactggctggatttcagtgtcatccttatg
gcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagta
ttgagagctttgaaaactatttctgtaataccaggcctcaaaaccatcgtgggtgccctg
atccagtcagtgaagaagttgtccgatgtaatgattctgactgttttttgtttgagcgtg
tttgcactaatagggctgcaactattcatgggaaacctaaaacataaatgtgtgcgatgg
ccaccacctgccagctatttcattccaactaacagatctttaagcctgaatgatacgatg
acaaatgagacagaattcatattcaactatgaagaatacattgaagatgatcgaaatcaa
tattttctggaagatgccaaagatgcccttttatgtggtaatggctcagatgctggtcaa
tgccctacaggttatttatgtctgaaagctggaagaaaccctaattatggttatactagc
tttgatacatttagctgggcattcttgtcattgtttcgcctgatgacccaggacttctgg
gaaaacctttaccagttgaccctgcgagctgctggcaaaacatacatgatattctttgta
ctggttatattcctgggatctttctacttggttaacttgattctggctgttgttgccatg
gcctatgatgagcaaaaccaggctactttagaggaagctgaacagaaagaggcagaattt
cagcagatgcttgaacaacttaaaagacatcaagaagaagcacaggctgcagccgctgca
gctgaggcaggagatgaaaatggaagaattggactctgtgaaatgtcccacagttcctca
gatgcgtcaaagcttagttcaaagagcgccaaggagagacgaaacagaaggaagaaacgg
agacaaaccgaactggatgctgaggaaagggataaagatgaaaggattcacaagtcagaa
tcagaggacaatggaagaaagggaaatggtttccggttttctattgatcgcaattgtctt
tcttatgaaaagaaaaattcctccccacatcagtcactactaagtatccgtggatccatc
ttttctccaagacgcaacagcagaagcagcatcttcagttttaaaggacggactaaagat
gtagggtcagaaaatgattttgctgatgatgagcacagcacttttgaagacaatgaaagc
agaaggggctccctctttattccacggaggcagggtgagcgacgcagcagtaacattagt
cagaccagtaggtcatccaggatgctaccagtgtttccagtgaatgggaagatgcacagc
acagtggactgcaatggagtggtttcacttgccggtggtccttcaactccaacatcaccc
attggacgacttctgccagaggtgataatagataagccagctactgatgacaatggcact
aatacggaaacagatcttaagaagaggcgatcaggatctcatcaattttctatggatttt
ctggaagatcctatgcagagacagagagcattaagtgtggccagtattctcacgaatact
atggaagaacttgaagaatctcgacagaagtgtcctccatgctggtataaatttgcaaac
actttcttgatctgggattgccatccaaactggctaaaaataaaagaaattgttcattta
atcgtaatggacccatttgtggatctcgctattactatctgcattgtgctgaacactgct
tttatggcaatggagcattatccaatgacaaagagctttgaggatgtactcacatatggg
aatttggtatttactggtatttttactggtgaaatgattttcaaaatcatagcactggat
ccttattattacttccaagaagggtggaatatttttgatggcatcattgtgagtctcagt
ctaatggaacttggtctcgctaatgtggaagggctatctgtgctgcgatctttccgattg
ctcagagtttttaaattggcaaagtcatggccaaccctgaacatgctgattaaaattatt
ggcaactcagtaggtgctttgggcaacttgactttggtgttggccatcattgtcttcatc
tttgctgtggtgggcatgcaactcttcggtaaaaactacaaggaatgtgtgtgtaaaatt
gacaagaactgtgtactgcctcgctggcacatgagcgacttctttcattcctttctaatt
gtgttccgtgtgttgtgtggagaatggattgagacaatgtgggactgcatggaagtatct
ggacaatctctgtgcctcattgtcttcatgatggtcatggtaattggtaatctcgtggta
ttgaatttatttttggctttgctactgagctcattcagtgctgacaaccttgctgctaca
gatgatgacagtgaaatgaataacctacagattgctgtggggaggatacagaaaggcatt
gattatgttaaaagaaatatgcgagaattaattcatagagtttttatcaggaggaaagtc
acagaagacatcaaacctcttgatgatttgcatagcaagaaagacatttatatctcagat
catgcagctgttgaaatcactaaagacattgactatcataaggatggaaattgcaccacc
tgtggaattggcagtagtatggggaaatacaatactgacgaaaatgactatatgtccttt
attcacaatccaagcctcactgttactgttccaatagctgtgggggagtcagactttgaa
aacctaaacacagaagacttcactagtgaatcagacctagaaggtagcaaagagaaactg
gctgaaagcagttcatcagaagggagcaccgttgacagaactccacctggagagggagag
caaccagaagaaataccagaagaatctatggaacctgaagcatgctttactgaaggatgt
gtacaaaaattcccattctgctatgtcaacatacaagaaggcagaggtaaatcatggtgg
aacctccgaaagacttgctacagaatagtagaacacaattggtttgaaacattcattatt
ttcatgattcttctcagcagcggtgccctggcatttgaagatatttacattgaacaaaag
cataacgtcaagtcaatgctggaatatgctgataaaatcttcacctacatctttattctg
gaaatgctgctgaagtgggtggcctatggttttgtgaagtatttcacaaatgcttggtgt
tggctggatttcctcattgttgatgtgtctttggtgagccttatagctaataccctaggc
tactcagaactaggtgctattaagtcccttaggacactgagagctttgagacctcttagg
gccttgtcacgttttgaaggcatgagggtggtcgtcaatgcacttcttggagcaattcca
tccattatgaatgtgctacttgtctgcctgatattctggctcattttcagtataatgggt
gtaaatctttttgctggaagatactaccactgtatcaatataactgacggaaaacagttc
tccatcaagattgttgacaatgaaagtgattgtgaacagcttaatgaaaccgcacgatgg
aaaaatgtaaaaatcaactttgataatgttggggctggctatcttgctttactacaagtg
gcaacatttaaaggatggacggacatcatgtatgcagctgttgattcaagaggtgtgaaa
cagcagcctgactatgaacacagtctgtacatgtacttttattttgtcatcttcatcatc
tttggatctttcttcactctaaatctgtttattggtgttatcattgacaacttcaatcaa
cagaagaaaaagtttggaggtcaagatattttcatgactgaagaacagaagaaatattac
aatgctatgaaaaaacttggctccaagaaaccacagaaaccaataccaaggcccttgaac
aagattcaaggaatggtgtttgattttgtaacccagcaagcctttgatatcactatcatg
attctcatctgtcttaacatggttaccatgatggtggagacagataatcaaagtaataag
atggatgatgtcttatattggatcaacatggttttcattgtccttttcacaagcgagtgt
gtgctgaaactgattgcactccgctattattactttacaattggctggaatacttttgac
tttgtggtggtcattctttctattgtaggcatgttcttagctgaaatcattgaaaaatac
tttgtgtcaccaacattatttagagttatccgacttgccagaattggtcgcatcctccgt
ttaatcaagggtgctaaggggatccgtacactactgtttgcattgatgatgtctcttcct
gctttgttcaacattggtctgttgttattcttagtcatgttcatttatgccatttttggg
atgtctaattttgcttatgtgaagaaggagtctggcattgatgacatgttcaactttgaa
acttttgggaacagcatgatctgcctgtttcagatcaccacgtctgctggctgggatggg
ttactggctccgattttaaatagtgggccaccagactgtgacccaacaaaggataatcca
ggcagccccataaagggagattgtggtaatccatcagtagcaattttattctttgtaagt
tacatcataatatctttcttgattgtcataaatatgtatattgctattattctggagaat
ttcagtgttgctacagaggaaagtgctgaaccactgagtgaggatgactttgaaatgttt
tatgaagtatgggaaaaatttgattcagatgcaactcaatttatggagtatggtagattg
catgattttgcagatgccttggaaccacctcttcgtgttgcaaaacccaacagaatacaa
cttatagctatggacttgcccatggttagtggagatagaattcactgtcttgatattttg
tttgcatttacaaagcgtgtgcttggtgagggtggagaaatggatgctcttcgacaacag
atggaagaacgctttatggcatccaatccctccaagatatcctatgagccaattacaacc
actttgcgacgtaaacaggaacatgtttctgcaactataattcagagagctttcagacga
tatctgattaggcgaacattgaaacaagcctctttcatgttcaaagaaaaaggtaaaaca
agtgagctactacctggcaaagaagaaatggtaatagataagtttaatgaaatttccact
acagacaaaactgatatgactccttctaccacatctccaccatcctatgacagtgtaaca
aaaccagagaaagcaagagaggagaaagagaaagaagatagaggcaaagatgtaagggac
tataaaaagtaa
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integrated database retrieval system
