Chiloscyllium punctatum (brownbanded bambooshark): 140483269
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Entry
140483269 CDS
T11285
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140483269 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140483269 (crnkl1)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140483269 (crnkl1)
Spliceosome [BR:
cpun03041
]
Complex B
Other components
Prp19-related factors
140483269 (crnkl1)
Complex C
140483269 (crnkl1)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
140483269 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
TPR_12
NRDE-2
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
140483269
NCBI-ProteinID:
XP_072437511
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All DBs
Position
11:complement(100283773..100322479)
Genome browser
AA seq
688 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAELQITAEQLLREAKERELELLPPPPTQKITDEEELND
YKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNVTLWLKY
AEMEMKNRQINHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPD
EQAWHSYINFELRYKEIERARLVYEKFVFIHPDVKNWIKYARFEEKHGYIGHARKVYERG
VEFYGEDHMDEQLFVAFAKFEEKQKEFDRVRVIYKYALDRIAKQKAQELFKNYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVRANPHNYDAWFDYLRLVESDGDLDTVHEVYERAIANVP
PIQEKRHWRRYIYLWVNYALFEELEAKDPEKTRQVYQACLELIPHKKFTFAKLWLLYAQF
EVRQKNLSLARRALGTGIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDIERARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEYERTRNLYMRL
LQRTQHVKVWISYVQFELSVDVPERISRCRQIYEDANRSLRNCEEKEERLIFLESWRDFE
TEFGTESSQERVRKLMPGRVKKRRKLQAEDGTDAGWEEYYDYIFPEDAANQPNLKLLAMA
KLWKKQLHDEKEPEDNPDKDADENETES
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaccgccgctggaaagcagcgaattcctaaagtggcgaaggtgaaaaataaa
gcacctgccgaattgcaaatcactgctgaacagctcctgagagaagcgaaagagagggaa
cttgaactccttccaccacctcctacacaaaagattaccgatgaggaggaattgaatgac
tacaagttaaggaaaagaaaaacatttgaagacaacatacggaaaaatcgaactgttatt
agcaactggatcaaatacgcacaatgggaggagagcttaaaagaaatacaacgagcacgt
tccatttatgagagagcattagatgtcgatcacagaaatgtaactctgtggttgaagtat
gcagaaatggagatgaaaaatcggcagattaaccatgcgcgaaatatctgggatcgcgca
attaccatcctgcccagggtcaaccagttttggtataaatatacatacatggaggagatg
ttaggaaatgttgcaggagcgcgacaagtgtttgagcggtggatggaatggcagcctgat
gaacaagcatggcactcctatatcaactttgaactccgatacaaagaaattgaaagagcc
aggctggtttatgagaagtttgtttttattcatcctgatgtgaagaactggattaaatat
gcccggtttgaagaaaaacatggttacattggacatgcacggaaagtatatgaaagagga
gtggagttttatggagaagaccacatggatgaacagctttttgtagcatttgcaaagttt
gaagaaaagcagaaagaatttgatcgcgtgagagttatctacaaatacgcacttgataga
attgccaaacagaaggctcaagagctcttcaaaaactatactgtatttgagaaaaagttt
ggggacaggagaggcattgaagatgttattgtcagcaaaagacgctttcagtatgaggag
gaagtcagggcgaatccacataattatgatgcctggtttgactaccttcgactagttgaa
agcgatggagatcttgatacagtacatgaagtatatgagcgtgcaatagccaatgtacca
cccattcaggaaaagaggcactggaggagatatatttacttatgggtcaactatgcttta
tttgaagaattggaagcaaaggatccagagaagactagacaagtgtatcaagcatgcttg
gaactcatccctcataaaaagttcacgtttgctaaattgtggctgctatatgcgcaattt
gaagttcgacagaagaacctatctctcgccaggagggctttaggtactggcataggaaaa
tgtccaaagaacaagctgttcaaaggatatattgaactagagctccagcttcgtgagttt
gatcggtgtaggaaactctatgaaaaatacctcgagttttcaccagagaactgcactact
tggattaaatttgctgagttggagaccattctgggtgatattgaacgggctcgtgcaatc
tatgaactggcaattggccaacctaggctagatatgccagaggttctttggaagtcttat
atagactttgaaattgagcaagaagaatacgaaagaacaagaaacctgtacatgcgtcta
cttcaacgtacacagcacgttaaggtatggatcagttatgttcaatttgagctttctgtg
gatgtgccagaacgcatatccagatgccgacaaatttatgaggatgccaacagatctcta
cggaactgtgaggaaaaagaagaacgactcatattcttggagtcctggagggactttgaa
acagaatttggcacagagtcttcacaagaaagagtgcgaaaactcatgccaggacgtgtc
aagaagaggagaaagctgcaggcagaagatgggacagacgctggttgggaagagtattac
gattacatcttcccagaagatgctgccaaccagccaaacctcaaactacttgcaatggcc
aagctctggaagaaacagctgcacgatgagaaagaaccagaagataatcctgacaaagat
gcagatgaaaatgagactgaatcatga
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