Chiloscyllium punctatum (brownbanded bambooshark): 140483558
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Entry
140483558 CDS
T11285
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140483558 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140483558 (xpc)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
140483558 (xpc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
140483558
NCBI-ProteinID:
XP_072437871
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Position
12:complement(3256808..3300570)
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AA seq
971 aa
AA seq
DB search
MVKRKGSTTQADCKRMKKDCSRTKTVKECPVNCAKQLPPDDDSQDFEPEKPLARSKHRGR
GAAKAGVSLTPQGKSARGKKLPKARERKRCSSVKEGGSKEIQEAVPTSGRLMESAKQQKE
SSSQDGDSTEDSEDEWEEVEELQTSMPEEPSASPFPEPTVPAKPLEIEIESPAHAKKRES
REKRELQFEDYLRRMINRFTRNLRIDIHKVHLLCLLANGMFRNRMCNEPELQALALSLVP
ATLAKVPGGRVEIPYISKLLNWFVSSFEIDTSLPNDEADSLSTVLKRRFSSRSTRSEQEM
VHLFLIILRTLAMASRLVISFQPVPFKENLKAKNVRGSKSKDNSQKVGHSVPDTKQECVP
EKGANGGVVVKLEREQDGAVKLLTEREGKSRPASKRNPAERANSGGNARRRTKTDKTLDR
GSAESGFEDEECPLSKTSVSPRPKNERRRRVASKVCYKEEDTEGDDESDSDFEVGNGSDS
NSYSDGDKKGKRISSQMKSPQGKQAVESSIFRTPKCEDSEEDDFENTPGKTKPCKRRSSN
SNKAKANSRGGRMIREVSLNSKDSDQWIEVYAEIEKKWVAVDCVRNTVNQPELCAKYASK
PFSYIISFDNENCVRDVTQRYDGAWMTVTRKHRVDPAWWDQTLAAYRSNHTERERDEDQE
MQVKMLSQPLPTSVAEYKNHPLYVLKRHLLKYETLYPPTAAILGYCRTEAVYSRDCVHTL
HSKDLWLKEARVVRDGEIPCKMVKSQSNRARRARLASWEDQDKDDLGLFGFWQTEPFSPP
IAANGKIPRNEFGNVYLFKPCMLPRGCKHLRVPNINRVARKLNIDCAGAVVGFDFHSGHS
HPIIDGYIVCEEHVETLLAACQEEEAEMARREQKKREQRVMGNWKLLVKGLLIRERLKAR
YSVKDSAALSSSPDVGRGSSLDGKADSNSTSVSDVTVSWPLNRQEETVKGPAKSRKQKKA
EEKHLFPFEKL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaggaaagggtcaacaacccaggctgactgcaaaaggatgaagaaggactgc
agcagaactaaaactgtcaaagagtgcccagtgaactgtgcaaaacagctgcctcctgat
gatgacagccaggattttgaacctgaaaagcctctggcaagatccaaacatcgtggaagg
ggcgcagcaaaggcaggtgtcagcctgacccctcagggtaagagcgccagaggaaagaaa
ctgccgaaagccagggagagaaaaaggtgctcttcagtcaaagaaggtggcagcaaagag
atacaagaggctgtacccacctctggcaggttgatggaatcagcaaagcagcagaaagaa
agtagttcccaggatggagacagtacagaggacagtgaagatgagtgggaggaagtggaa
gagctccagacctctatgccagaagaaccatctgcttctccctttcctgaacccaccgtc
cctgcaaaaccactcgagattgaaatcgaaagtccagcacacgccaagaagagggagagc
agagagaagagagagcttcagtttgaggattacctacgtcggatgataaaccgttttact
cggaacctccgcattgacattcacaaggtgcatcttctgtgtctgttggctaacggtatg
ttccggaataggatgtgcaatgaaccagagcttcaggccttggcgctgtccctggtacct
gccacacttgccaaggtgccaggtggccgtgtagaaattccatacatctctaaactgctc
aactggtttgtgtcatcgtttgagattgacacttctctccccaacgatgaggcggactct
ctgtctacggtgctgaagaggagattcagcagccgttccacaaggagtgagcaagaaatg
gttcatttgtttctaatcatccttcggactctggccatggcatcacggcttgtgatttca
tttcaacctgttccatttaaagaaaatttgaaagcgaagaacgtgaggggcagcaaatct
aaagataattcccagaaagttggtcactcggtcccagacactaaacaagagtgtgtgcct
gagaaaggagcaaacggaggagtcgtagttaaactggagagggagcaagatggtgcagtg
aagctgttgactgaacgagaaggcaagtctcggccagcatcgaaaaggaaccctgcagaa
cgtgcaaacagtgggggaaatgctagaaggagaactaaaactgacaaaactcttgacaga
ggttctgctgaatctggatttgaggatgaggagtgcccactatctaaaacatctgtctct
ccaaggccaaagaatgagcgtagaaggagagtagcctcaaaagtatgttacaaggaagag
gacactgaaggcgatgatgagagcgattctgattttgaggttggcaatggttctgattct
aacagttattccgatggagataagaagggcaagagaatctcttcacaaatgaagtctccc
caaggcaagcaagcagtagagtcttcaatctttaggactcccaagtgtgaggacagtgag
gaagatgattttgagaacactccagggaaaaccaaaccctgtaagagaaggtcttcaaac
tccaacaaagccaaagccaacagcagaggtggaagaatgattagggaggtgtccctgaat
tcaaaagactccgatcaatggattgaggtctatgcagagatagagaagaagtgggtagca
gttgactgtgtacgcaacactgtgaaccagccggaactctgtgctaaatatgcttccaaa
ccattctcctacatcatcagctttgacaacgagaattgtgtgagagacgtcacccagaga
tacgatggggcttggatgaccgtgacgaggaaacaccgtgttgaccctgcctggtgggac
cagactttggcagcctacagaagcaatcatacagagcgtgagagagatgaagaccaggag
atgcaagttaagatgctcagtcaaccattgcccacgtctgtagccgaatataaaaaccac
cctctctatgtcctgaaaagacatctgctgaaatacgagaccctgtatcctccgacagca
gctatcctcggctactgcaggacagaggctgtgtactcaagagactgcgtgcacacactt
cattccaaggacctctggctgaaggaagcccgggtggtgagagatggagagatcccctgt
aagatggtgaaaagccaatcaaatcgagcacgtcgagcccgattggccagttgggaagat
caagacaaggatgatcttggactctttggcttctggcaaacagagcccttttctccaccg
attgctgccaatgggaagatccctcgcaatgaatttggaaatgtctatctcttcaagccc
tgtatgcttcccagaggctgcaagcacctgagggtccccaacatcaaccgagtggcccgg
aaactgaacatcgactgtgcaggggccgtggttggatttgatttccattcgggtcattca
catcccatcattgacggatatattgtctgtgaagaacatgtggagactctgttggcagct
tgtcaggaagaagaggccgaaatggcaagaagagaacaaaagaaacgagagcagcgtgta
atgggaaactggaagctgctggtgaaaggcttattgatcagggaaagactgaaggctcgc
tatagtgtcaaggacagcgctgccctgagctcctctccggatgtggggaggggcagctca
ctcgatgggaaagctgacagtaattccacctcagtcagtgatgtgaccgtctcgtggccc
ttgaaccgtcaggaggagacagtgaaggggccggcaaagagcaggaaacagaagaaagca
gaagagaaacacctcttcccattcgagaagttgtga
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