Coniophora puteana: CONPUDRAFT_163808
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Entry
CONPUDRAFT_163808 CDS
T03134
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cput
Coniophora puteana
Pathway
cput03022
Basal transcription factors
cput03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CONPUDRAFT_163808
09124 Replication and repair
03420 Nucleotide excision repair
CONPUDRAFT_163808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_163808
03400 DNA repair and recombination proteins [BR:
cput03400
]
CONPUDRAFT_163808
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CONPUDRAFT_163808
DNA repair and recombination proteins [BR:
cput03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CONPUDRAFT_163808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GvpG
Motif
Other DBs
NCBI-GeneID:
19204998
NCBI-ProteinID:
XP_007766712
JGI:
Conpu1_163808
UniProt:
A0A5M3MUL7
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MPCSAKASYKKLPGTLELNGTHIQWTQDGKKAPAVRVPHASFFSLFCSKDGSPQVRLKLA
LVNDDTGHNFTFISTPQSMALAERETFKTELTNIIAKNRSAPQQTPQPAAPPSHIKLPTN
SGPITAASSTPGTPASFAPAASRAASVSSDGRTPIIPGTDAASDFRLRKRVLLANTELAS
LHRELVMTGQITEAEFWEGREHLLLAESSSTSQKRGRPGTLVDPRPQAIEGGEVKIIITP
QLVTDIFEEFPVVQKAYAEVVPKKLNETEFWRRYFQSKLFHAHRASIRSSATQHVVKEDP
IFDKYLEKDDDEIEPRRARDEIHDLYINLGATNEDHEETGNTKDFTMQAGRQRGALPLIR
KFNEHSERLLNSTLGDGPAKKKRKTDDDDEYRRIELEDLNDFEASSGIVLEMQDRQRYFE
GRGSGANGNADGDDPAKAVDIRHVFAEARKSTVDWSSRFSQLKVEKKAGDAAFQTMTQNV
ATRLKSKGQKNDLPPTLFASMRTCQTAANEFLRQFWTSMYPPIALPGLSNGALTTAADQQ
NRAAKAAKMAGYLGKTHEKVASLVEIAKREGADVSRVEVAMKPMLDAVDHATTFWSARQA
KGTKAR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgcagcgcaaaggcgtcgtacaagaagttacccggcactctcgagctcaacggc
acccatatccaatggacacaggacggcaagaaggcgccagcagtacgcgtacctcatgct
agtttcttttccctgttctgcagcaaggatggctctcctcaggttcgcctcaagttagca
ctcgtcaacgatgacacaggccacaacttcacattcatctccacccctcaatcgatggca
cttgcggaacgagagaccttcaagacagagcttaccaacatcatcgccaaaaaccgaagt
gcacctcaacaaacgccccagccggctgctcctccgtctcacatcaaactccccaccaac
tctgggcccatcaccgccgcctcctcaactcctggaaccccagcttcgttcgcccctgca
gcctctcgtgcagcttccgtttcaagcgatgggcgcactcccattataccaggaacagat
gcggccagcgatttcagacttcggaaacgcgttcttctcgccaacacggagctggcttcc
ctccacagggagcttgtcatgacgggtcagatcaccgaagcagagttctgggaagggcga
gaacaccttcttcttgccgagtcaagctcaacgtctcagaaacgaggtcgaccaggaact
ctagtagacccacgccctcaagctattgagggcggtgaggtcaaaatcatcattacgcct
cagctcgtgacggatatctttgaggagttccctgttgttcaaaaggcatatgcggaagtg
gtgcccaagaagctcaacgaaacagaattttggagacgatattttcagtcaaaactcttt
cacgcccatcgagcaagtatccgctcatccgcaacgcagcacgttgtcaaggaggacccc
atttttgacaagtatctcgagaaggatgacgatgagatcgaacctcggcgtgcacgagac
gagatacacgatctttatattaatcttggggcaactaatgaagaccacgaggagacgggg
aacacgaaagactttactatgcaagctggtcgccagcgtggagcccttcctttgattcga
aaattcaacgaacactctgagcgattactaaactcgacattaggagatggtccagcgaaa
aagaagcggaaaacagatgatgacgacgaatatcgacgaatagaacttgaagacctcaat
gacttcgaagcatcttccggaattgttctagagatgcaggaccgtcaacgatatttcgag
ggccgaggctcaggtgctaatggaaacgctgacggcgatgaccctgcgaaggccgttgac
atcaggcacgtttttgcggaggcccggaagagtacagtggattggtcgtcaaggttctca
cagcttaaggttgaaaagaaggcgggggatgcagcgttccaaaccatgacccagaatgtt
gctactcgactaaagtcaaaggggcagaagaatgatcttcccccgactctcttcgcctcg
atgcggacgtgtcaaacagcagcgaacgagtttcttcggcaattctggacgtcgatgtat
ccgccaatagccctccccgggttgtcgaatggggctttaaccaccgctgcggatcagcag
aatcgtgcagccaaagctgccaagatggcagggtacctcggtaagacgcacgagaaggtc
gcatctcttgtggagattgcgaagcgagagggggcagatgtgagtagggtcgaagtggct
atgaagcctatgctcgacgccgtcgaccacgcgactactttttggagcgccagacaagcg
aagggcaccaaagctcggtag
DBGET
integrated database retrieval system
