Coniophora puteana: CONPUDRAFT_52066
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Entry
CONPUDRAFT_52066 CDS
T03134
Name
(RefSeq) TPR-like protein
KO
K12600
superkiller protein 3
Organism
cput
Coniophora puteana
Pathway
cput03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CONPUDRAFT_52066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_52066
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CONPUDRAFT_52066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_CcmH_CycH
TPR_14
TPR_17
TPR_12
TPR_8
TPR_19
ANAPC3
TPR_11
TPR_22
TPR_9
PknG_TPR
TPR_7
TPR_15
Motif
Other DBs
NCBI-GeneID:
19207490
NCBI-ProteinID:
XP_007766319
JGI:
Conpu1_52066
UniProt:
A0A5M3MWD0
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
GLSKLYERTEQWSSYVQTLQQLMHMFSKGLNADTIKCGETYSKVIIALKEHGSRPEVIGA
LSLLLPSSPFYSTLSAIPPPDPSNPAASPSYAFPWPDSLELYDSLIELLEKEEESTFKSE
FDKRRTRLGASPPEELKKEIGQEICESSTYLPSLYNEVLNHPQTSDGHRRETESKLIRFL
ERLVIALPSSTEEKARLRSELDGLVQGVVSIGIPDEYAWELYMEGNDYLQIEDIGLPQLR
QFISLFHSSSLARVIRAYLVYVGLSPDEENSEGYEEEDDPYDVVLVRLASSLYSSDARRS
SLDYVTASAEYTNTVKIAETALALLSKREKEAGVAMSQCRQSLEECLSWALVHLHPPRHH
PRAIHLVEAALAQNAQRSRSLITKGYIMQNASRWQEAADLASRKARVIQDNTLLAEEEYS
WCVSRLEGRIVEGLAGLQSVKATLEGLHEKDSSHAEDIARCVWRIGECNWANGDAEAAYA
SFIACLKSATNYAPAYTSLGIYYSTPKSDGAMDATRANKCFQKAFELDPREVDAARRLAE
GFANEQEWDLVEVIARRTIEGEGGTTDAGGTTAGAIGRYVPMNTWAWKALGIVELTRRRY
SQAVQALQVALRVDANDQLSWVRLGEAYSRAGKHVAALKALSRAQELDPADWVCTFFIGE
VQREMGLFPEALASLQKILDTRPAELGALIALAQTQLDQSRQELVRGFSHRAEDTLVACI
RTSLSAVQAGASAGHRAVSWKIVADALFLLAQSSPVSFIEVTQVRDILSKVTTIVGPNTH
TSPRLSAIFSLSTLPDGAELAGRHALEVAIASYDYRVMLGSADEAAIGSSLYDLAIALYT
WTYSLPTDNRDNVSGMAASILVQALRRNPIDATYWIAFGNINFVTKPKSSQHAYVKAIEV
EGKNVVAWTNLGLLYLYHHDFELATEALYRAQVLDPDHALAWVGQALLATAKGHEEDAQN
LLEYATSLTANEPSADLEFAYRTFHLFPLQPLSPSQDTIFPVYFVLDRYIKRRPSDPSAL
HLLGLICERMGDLERAATVLKESISLLEAAYEESEDTSIERQFTIAHTNYARVRLALQDV
QGALESSQNALGLVPEVDEKNTRVLRISARIGCGLAYFRLGQLQEALDAFQSALQDIGED
VELKGHVTVLLARTMWAIEPSADFREGAKSLLLECIANDPENLLAISTLAGMGILTDDDG
LVDAALSEMLSLPIEKRHELDPERNVTYLLIQHEVAQGNGERALQVAQKALHDEPSNVRV
RGELALLFMQHDARQSALSLIPSGSSLEEDQKILWLAAVAEEGETTLRIAQKAVMLGPGG
VENWRSLAYVRACV
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
ggcctgtccaagctgtatgagcgtacggaacaatggagtagctacgtgcaaacgctccag
cagttgatgcacatgttcagcaaagggctgaacgcagacaccatcaagtgcggagaaacc
tactcaaaagtaatcattgccctgaaagaacatgggtctcgtcctgaagtaattggagca
ttgtcactcctccttccttcatccccgttttactctacactatcagcgatacctccccct
gaccccagcaatccagcagcgtcaccttcgtacgcgtttccatggccagactcacttgaa
ttgtatgattcgttgattgaactccttgagaaggaggaggaatcgacgttcaagtcagaa
ttcgataaacgtcgtacccgacttggcgcgtcgcccccagaggagctcaagaaagaaatc
ggacaagagatttgcgagtcttccacttatttaccgtcattgtacaatgaagttttaaat
caccctcaaacgtcggatggccatcgacgagagacagagtcgaagttgatacggttcctt
gagcgattggtcatagctcttccatcatccactgaggagaaggcccgtttgcgctcggag
ctcgatgggcttgtccagggggtagtcagcatcggcatacctgatgaatacgcttgggaa
ttatatatggaaggaaatgattatctgcagatagaggatataggattacctcagctgcgt
caattcatctccctcttccatagctctagcttggcgcgagtgatacgagcatatctggta
tacgttggtctatcccccgacgaagaaaactcggaagggtatgaagaagaggacgaccct
tatgacgtggtccttgtacgtcttgcctcctctctttattcatcagatgcccgccggtct
tctcttgattatgtcactgcttctgcagaatacacaaacactgtcaaaattgctgaaaca
gcccttgccttgctctcaaagcgagaaaaagaagcgggtgtggccatgtcacaatgtcgt
caatcgttggaagagtgtctatcttgggcactcgtgcaccttcatcctcctcgtcaccat
ccccgagcaatacatcttgttgaggctgcactggctcagaatgctcaaaggagccgcagc
ttaattactaagggctacatcatgcagaacgcttctcgttggcaagaagcagcagatctg
gcaagccgcaaagccagagtcatccaggacaacacgctgttagcagaagaagaatactct
tggtgtgtcagccgtcttgaaggtagaattgtcgaaggcctcgctggtttgcaaagtgtc
aaggcgacacttgaggggttgcatgaaaaagattcgtctcatgccgaagacatagcacgc
tgcgtatggaggattggcgaatgcaattgggccaacggcgatgctgaagctgcctacgct
tcgttcatcgcctgcctcaaatctgcaacgaactatgcacctgcatatacttccctcgga
atatattactctacaccaaaatcagatggggctatggatgccacgcgtgctaataagtgc
ttccaaaaagctttcgaactcgacccacgagaggtggatgccgcgcgacgtcttgcagaa
ggatttgcaaatgaacaagaatgggacctagttgaagtgatagcgcgacgcacaattgaa
ggcgaaggagggacaacggacgcaggagggacaactgcaggagccataggccggtatgtg
ccaatgaatacctgggcatggaaggcgttagggattgtagagctcactcgcagaagatac
tcgcaggctgtccaggctttgcaggtagcccttcgtgtagatgcgaatgaccagctttcc
tgggtgcgcctgggtgaagcctacagtcgagccggcaaacatgttgctgctctcaaagcc
ctgtctcgtgctcaagaacttgaccctgccgactgggtctgtacgttttttattggcgag
gttcagagagaaatgggacttttccctgaagcattggcatcgcttcagaagattctggat
acgcgtcccgctgagttaggtgctttgatagcgttggctcaaacacagctggaccaatcg
aggcaggagcttgtgaggggtttttcccacagagccgaggatactctcgtcgcttgcata
cggaccagtttatctgccgtacaggcaggggctagcgctggccaccgggcggtttcatgg
aaaatcgttgccgacgcgctcttcctattggcgcagtcgtcgccggtgtcgttcatcgag
gtgactcaagtcagagatatactgagcaaggttacaaccatagtgggcccaaatacacat
acaagccctcggctctccgccattttctcattatcaaccctcccagatggcgcagaacta
gccggcaggcatgctctagaagtcgctattgcatcctatgattatagggtcatgctgggc
tcagcagatgaagcagcgataggcagctccttatacgatctggcaatcgctctgtataca
tggacatactcactccctacggataatcgggacaatgtatcagggatggctgcttccatc
cttgtgcaggcactgcggaggaaccccatcgatgctacttactggattgcctttggtaac
atcaacttcgtcacaaagcccaagagctcgcaacatgcctatgtcaaagcaattgaggtt
gagggaaagaatgtcgtggcatggacaaatctcggccttttatacctctaccaccacgac
ttcgagcttgcaaccgaggcattgtaccgagctcaggttttagaccctgaccatgcctta
gcatgggttggacaagccttgttagctacagcaaaggggcacgaggaagatgcccagaac
ctcttggaatacgccacgagcctcacggctaacgagccatctgcagatttggagttcgca
taccgcaccttccacttatttcccttacagccattatctccctcgcaggatacaatattc
ccagtctattttgtcctggatcgttatatcaagcggaggccctcggacccatcggcattg
catctactcggcctcatatgcgaacgcatgggcgatttagaacgagcagctacagtactc
aaggagtccatctcccttctggaagcagcatatgaggaatctgaggacacatcaatcgaa
cgacaattcactattgcgcatacgaattatgcacgagtccgcttggccctgcaagatgtt
caaggagctcttgagtcttcccaaaacgccttgggtttggtcccagaagttgacgagaaa
aatactcgagtgctgcgaatttctgcgcggattggatgtgggctggcgtattttaggttg
ggccaacttcaagaagcattagatgctttccagagcgcccttcaagatataggagaagat
gttgaattgaaaggacatgtgactgtactgctcgcgcgtacgatgtgggcaattgaaccc
agcgcagactttagagagggcgcaaaatcgttgctgctcgagtgcattgcaaacgaccct
gaaaacttactagcaattagcacccttgcgggcatgggcatcttaaccgatgacgacggt
ctggttgatgcagccctttcggaaatgctgtcacttcctatcgagaagagacacgaacta
gacccggagcgcaacgtcacctatttgctcattcagcatgaagtagcacagggcaacggg
gagagagctttgcaagtcgcccaaaaggcactgcatgacgaaccatcgaacgtgagggtc
agaggcgaactggccttgctttttatgcagcacgatgctcgacaatcggcactttcactg
ataccttcgggaagctctctggaggaagatcagaagattctgtggcttgccgcagtggct
gaagagggggaaacaactctaagaatagctcaaaaagcagtcatgcttgggcctggaggg
gttgaaaattggcgttctctggcgtacgtgcgtgcatgtgtataa
DBGET
integrated database retrieval system
