KEGG   Cryptosporidium parvum: cgd4_2710
Entry
cgd4_2710         CDS       T00168                                 
Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03018  RNA degradation
cpv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    cgd4_2710
  09123 Folding, sorting and degradation
   03018 RNA degradation
    cgd4_2710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpv03019]
    cgd4_2710
   03041 Spliceosome [BR:cpv03041]
    cgd4_2710
Messenger RNA biogenesis [BR:cpv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     cgd4_2710
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     cgd4_2710
Spliceosome [BR:cpv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    cgd4_2710
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 3372821
NCBI-ProteinID: XP_001388069
ApiDB_CryptoDB: cgd4_2710
UniProt: A3FQL4
LinkDB
Position
4:628187..628420
AA seq 77 aa
MNLALNNVICNSRDGNGFFKMVECYIRGNNIKLIRISDENINTAKDDMTQRETARLGNRG
RPRNETRASRVRSSKWV
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaacttagcacttaataacgttatttgtaattcaagagatgggaatggtttttttaag
atggttgagtgttatattagaggtaataacatcaagttaatcagaattagtgatgagaat
ataaatactgcaaaagatgatatgactcaaagagaaactgctaggctcggaaatagagga
aggcccagaaatgaaacaagagcttcgagagttagatcttctaaatgggtgtaa

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