Cryptosporidium parvum: cgd4_2710
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Entry
cgd4_2710 CDS
T00168
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03018
RNA degradation
cpv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
cgd4_2710
09123 Folding, sorting and degradation
03018 RNA degradation
cgd4_2710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd4_2710
03041 Spliceosome [BR:
cpv03041
]
cgd4_2710
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
cgd4_2710
mRNA degradation factors
5'-3' decay
Lsm complex
cgd4_2710
Spliceosome [BR:
cpv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
cgd4_2710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
3372821
NCBI-ProteinID:
XP_001388069
ApiDB_CryptoDB:
cgd4_2710
UniProt:
A3FQL4
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All DBs
Position
4:628187..628420
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AA seq
77 aa
AA seq
DB search
MNLALNNVICNSRDGNGFFKMVECYIRGNNIKLIRISDENINTAKDDMTQRETARLGNRG
RPRNETRASRVRSSKWV
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagcacttaataacgttatttgtaattcaagagatgggaatggtttttttaag
atggttgagtgttatattagaggtaataacatcaagttaatcagaattagtgatgagaat
ataaatactgcaaaagatgatatgactcaaagagaaactgctaggctcggaaatagagga
aggcccagaaatgaaacaagagcttcgagagttagatcttctaaatgggtgtaa
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