Coccidioides posadasii: 9697711
Help
Entry
9697711 CDS
T01332
Symbol
CLF1, D8B26_007358
Name
(RefSeq) NineTeen Complex (NTC) component
KO
K12869
crooked neck
Organism
cpw
Coccidioides posadasii
Pathway
cpw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9697711 (CLF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpw03041
]
9697711 (CLF1)
03036 Chromosome and associated proteins [BR:
cpw03036
]
9697711 (CLF1)
Spliceosome [BR:
cpw03041
]
Complex B
Other components
Prp19-related factors
9697711 (CLF1)
Complex C
9697711 (CLF1)
Chromosome and associated proteins [BR:
cpw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
9697711 (CLF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
TPR_19
Suf
HAT
TPR_16
U3_assoc_6
TPR_CcmH_CycH
NRDE-2
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
9697711
NCBI-ProteinID:
XP_003072216
UniProt:
C5NZ88
LinkDB
All DBs
Position
4:complement(join(1349442..1349681,1349741..1351516))
Genome browser
AA seq
671 aa
AA seq
DB search
MDSSRGPPRVKNKAPAPQQISAEQLLREAVDRQEPGLQAPTQRFADLEELHEYQHRKRRE
FEDYVRRNRINMNNWMRYAQWELEQKEFFRARSIFERALDVDSTSVVLWIRYIEAEMKSR
NINHARNLLDRAVTILPRVDKLWYKYVYMEEMLGNIAGARQVFERWMSWEPDEGAWSAYI
KLEKRYNEFDRARAIFERFTAVHPEPKNWIKWARFEEENGTCGLVREVFGLAIETLGDDF
MDERLFIAYARYETKLKEHERARAIYKYALDRLPRSKSAVLHKAYTTFEKQYGDQEGVED
VILSKRRVQYEEQVKENPKNYDAWFDYIRLEEASGNVERVRDVYERAIAQIPPSQEKRHW
RRYIYLWIFYALWEEMENHDFGRARQIYQECLKLIPHKKFTFAKVWLLKAQFEIRQMDLR
AARRTLGHALGACPKDKLFRGYIDLERQLFEFVRCRTLFEKQIEWNPSQTQAWIKFAELE
RGLDDLERARAIYELGISQPSLDMPELLWKAYIDFEEYEGEYDRTRSLYERLLEKTDHVK
VWINYARFEINIPEIEDDEDEEKPVSEEAKSRARKIFERAHKVMKEKDLKEDRVALLNAW
KSFEQTHGTPTDITNIEKQMPRKVKKRRKLEEDRYEEYMDYVFPADDESTANLSKLLQKA
YQWKQEQGNIS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtcgcggggcccaccgcgggtcaaaaataaggccccagcgccgcagcagatt
tcagcggagcagctccttcgtgaagctgttgaccgccaggaaccaggtcttcaagcaccc
acgcagcggtttgccgaccttgaagaactccatgaatatcaacacaggaaaaggagggaa
tttgaagattatgtgagaagaaacaggattaacatgaacaactggatgcgctatgctcaa
tgggaactggaacaaaaggagtttttcagggcccggtcgatatttgagagagcattggac
gttgattccacgtccgttgttttatggatccgatatattgaagcggaaatgaagtcgcga
aacattaaccatgcaagaaaccttctcgaccgcgcggtgactattctacctcgagtggat
aaactatggtacaaatacgtgtatatggaagaaatgttgggtaacattgcgggtgctcgg
caagtttttgaacgatggatgtcgtgggagcctgatgaaggcgcatggagtgcatacatc
aaactcgaaaagcggtacaatgaatttgaccgagctcgagccatctttgaacgattcaca
gccgtgcaccccgagcctaaaaattggatcaagtgggcccgttttgaagaagaaaatgga
acctgtggcctagtgagagaagtatttgggctggctattgagacgctgggtgatgacttc
atggacgagagactctttattgcctatgctcggtatgaaacgaaattgaaggagcatgaa
cgcgcgagagccatatataagtatgctcttgataggcttccacgttcaaaatccgctgtt
ttacacaaggcatacaccacctttgaaaaacaatatggtgaccaggaaggtgttgaggac
gtgattctttcgaaaagaagagttcagtatgaggagcaagtcaaggaaaatcccaaaaac
tatgatgcctggtttgattatatccgactcgaagaagcttctggaaatgttgaacgagtt
agagatgtttatgagcgagctatagctcaaattccaccatcccaggagaaacgtcactgg
cgtcggtatatctatttgtggatattctacgctctctgggaagaaatggaaaatcacgat
tttggaagggcccgtcaaatatatcaggaatgcttgaaattaattcctcataaaaagttt
acttttgccaaagtttggctgttgaaggctcaatttgagatcaggcaaatggaccttcgg
gctgcgaggagaacactcgggcatgccctaggggcttgtccaaaagataagctattcagg
ggctatatcgatttagagcgacaactctttgaatttgtacgatgccggacactttttgaa
aagcagatcgagtggaatccctctcaaacacaggcctggatcaagttcgcggaattagaa
cggggattagacgaccttgaacgcgcacgcgcgatatacgaactcgggataagccagccg
tcattggatatgccagaattattatggaaggcatatatagatttcgaggaatatgaagga
gaatatgaccgcactcgaagcctgtacgagcggttgcttgaaaagactgaccacgtcaaa
gtctggatcaattacgcgcggtttgaaatcaacattcctgaaatcgaagatgatgaagat
gaagagaagcccgtcagtgaagaagccaaatcccgggctaggaagatattcgaacgggca
cataaggttatgaaggaaaaagatctaaaagaagatagagtggcattgctaaatgcatgg
aaatccttcgagcaaacccacggtacaccaacagatatcacaaatattgagaagcaaatg
ccgcgcaaagtcaagaagcgacgcaaactagaagaggatcgttacgaggaatacatggac
tacgttttccctgccgacgatgagtccacagcaaatctgtccaaactcttgcaaaaagcg
taccaatggaagcaggagcaaggaaacatctcatag
DBGET
integrated database retrieval system
