Corynebacterium pseudotuberculosis I19: CPI19_01660
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Entry
CPI19_01660 CDS
T01878
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cpx
Corynebacterium pseudotuberculosis I19
Pathway
cpx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPI19_01660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpx03021
]
CPI19_01660
03400 DNA repair and recombination proteins [BR:
cpx03400
]
CPI19_01660
Enzymes [BR:
cpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPI19_01660
Transcription machinery [BR:
cpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPI19_01660
DNA repair and recombination proteins [BR:
cpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPI19_01660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ADO25612
LinkDB
All DBs
Position
339214..342696
Genome browser
AA seq
1160 aa
AA seq
DB search
MAVSRQTKSVADIPGAPERFSFAKITEPIEVPGLLDIQLDSFAWLIGTPEWRARQQEELG
ESVRITSGLEEILEELSPIQDYSGNMSLSLSEPRFEDMKNTIDECKDKDINYSAPLYVTA
EFINNETQEIKSQTVFIGDFPMMTDKGTFIVNGTERVVVSQLVRSPGVYFDQTIDKSTER
PLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEQITERFGFSEI
MMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNAFFRAKRYDLAKVGRYKVN
RKLGLGGDNEGLMTLTEQDIATTLEYLVRLHAGESTMVAPNGDVIPVDTDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGPNIGLIG
SLASYARVNSFGFIETPYRKVENGVLTDQIDYLTADEEDRFVVGQAHVEVDAQGKITADS
VTVRVKNGDIQVVAPESVDYLDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
VRSEAPFVGTGMERRAAYDAGDLIINKKAGAVENVSADFITVMADDGTRETYMLRKFERT
NQGTCYNQIPLVNLGDRVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYEDAIILN
QRVVEEDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLKDLDERGIVRIGADVRD
GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRRFSREDD
DDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFMPDGTPVDIILN
THGVPRRMNIGQVLEVHLGWLAAAGWKIDPEDPANAELLKTLPEDLYDVPAGSLTATPVF
DGATNEEVAGLLTNSRPNRDGDVMVDANGKAQLFDGRSGEPFPYPVSVGYMYMLKLHHLV
DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV
GRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELSGSDDDEFDQ
AGASLGINLSRDERSDADIA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagaccaagtcagtggccgacatccccggggctcccgaacgtttt
tcgttcgccaaaattacggaacctattgaggtcccgggacttcttgatattcagctagat
tccttcgcatggctcattggtacgcccgagtggcgtgctcgtcagcaggaggagctaggt
gaaagcgtccgcataaccagcggactggaagaaatcttggaggagctatctccgattcag
gattattccggaaacatgtcattgtctctctcggagccccgcttcgaggacatgaagaac
actatcgatgagtgtaaagacaaagacattaactattctgcgccgctttatgtgactgca
gaatttatcaataatgaaactcaggagatcaagtcccagactgtcttcatcggcgatttc
ccgatgatgaccgacaagggaaccttcatcgttaacggcactgagcgtgtcgtggtctcc
cagcttgttcgttcgcctggcgtttactttgaccagacgattgataagtccaccgagcgt
ccgctgcactctgtgaaggtgatcccttctcgcggtgcgtggttggaatttgacgtggat
aagcgcgacaccgttggtgtccgtattgaccgcaaacgtcgccagccggtgaccgttctg
ctcaaggctcttggttggaccactgagcagatcacggagcgctttggtttctccgaaatt
atgatgtccacgcttgagtcggacggtgtagctaacaccgatgaggctctgctggagatc
taccgcaaacagcgtccgggtgagcagccgactcgtgacctcgcgcagtcgctgctggat
aacgccttcttccgcgcgaagcgttacgaccttgccaaggttggacgctacaaagtgaac
cgcaaactcggtctcggtggggacaacgagggtctgatgactctcactgagcaggacatc
gcaaccactctcgagtacctcgtgcgtctccacgctggtgagagcactatggttgcaccc
aatggtgatgttatccctgtggatacggatgacattgaccactttggtaaccgtcgtctc
cgtacagtcggagaactgattcagaaccaagtccgcgtgggcctgtcccgcatggagcgc
gtggttcgtgagcgcatgactacccaggacgcagagtctattactcctacctccttgatc
aacgtgcgcccggtttctgctgccatccgcgagttctttggtacctcccagctctcgcag
ttcatggatcagaacaactccttgtctggcctcacacacaagcgccgtctctctgctctg
ggcccaggcggcctgtcgcgtgagcgcgctggcattgaggttcgagacgttcacgcttct
cactatggtcgtatgtgcccgattgagactcccgaaggtccgaacattggtttgatcggt
tccttggcttcctatgctcgggtaaactctttcggcttcatcgagaccccctaccgcaag
gtggaaaacggtgttctcaccgatcagatcgattacctcaccgcagatgaggaagatcgt
tttgtggttggtcaggctcacgtcgaggtagacgcacagggcaagatcaccgcagatagc
gttactgttcgtgtgaaaaatggtgacatccaggtcgtggcaccggaaagcgttgattac
ctagacgtttccccacgccagatggtctctgtggctaccgccatgattccgttccttgag
cacgacgacgctaaccgtgccctcatgggcgcgaacatgcagcgtcaggctgtgccgctg
gttcgttcagaagccccgtttgtgggaaccggcatggagcgtcgtgctgcttatgacgcc
ggcgacctcattatcaacaaaaaggctggcgctgtagagaacgtctccgctgatttcatc
accgtgatggctgatgacggcacccgtgagacctacatgctgcgcaagtttgagcgcacc
aaccagggcacctgctacaaccagatcccattggtgaacttgggcgaccgcgttgaggcc
ggacaggttctcgcagatggccccggtactcacaacggtgagatgtcgctcggccgcaac
cttcttgttgcgttcatgccatgggaaggccacaactacgaggacgctatcatcctcaac
cagcgtgttgtggaagaggacattcttacttcgatccacatcgaggaacacgagattgat
gcccgagacaccaaacttggtgcggaggagatcactcgtgagattcccaatgtgtccgag
gatgtgctcaaggatctcgatgagcgcggcatcgttcgcatcggtgctgatgtccgcgac
ggcgatatcttggtgggtaaggtcactcctaagggtgagaccgagctgacccctgaagag
cgcctgctgcgtgcaatctttggtgagaaggcacgtgaggttcgcgatacctctatgaag
gtgcctcacggtgagaccggtaaggtcatcggcgttcgtcgtttctcccgtgaagacgat
gatgatctcgcgcctggtgttaatgagatgattcgtgtctatgttgcccagaagcgcaag
atccaggacggcgataagcttgctggtcgccacggtaacaagggtgttgttggcaagatc
cttccgcaggaagacatgccattcatgcccgacggtaccccggttgacatcatcctgaac
acgcacggtgtgcctcgtcgtatgaacatcggccaggtgctggaagtccaccttggttgg
ttggctgctgccggttggaagatcgaccccgaagaccccgctaacgccgagctgcttaag
acgcttcctgaggatctgtacgacgttcctgctggttcgcttaccgcaacaccagtgttc
gacggtgctaccaacgaggaagttgcaggcctcctaaccaattctcgtccaaaccgcgac
ggcgatgtcatggtggacgcaaacggcaaggcacagcttttcgacggtcgttccggcgag
cctttcccatacccagtgtctgtcggctacatgtacatgctgaagctgcaccacttggtt
gatgagaagatccacgcacgttctaccggcccttactccatgatcactcagcagccgttg
ggtggtaaggctcagttcggtggacagcgcttcggcgaaatggaggtgtgggcaatgcag
gcttatggcgctgcctacacgcttcaggagcttctgaccatcaagtctgatgacgtagtc
ggacgtgtgaaggtctacgaggcaatcgttaagggcgagaacattccagatccgggtatc
cctgagtccttcaaggtactcctcaaggagcttcaatcgctgtgcttgaacgtggaagtt
ctttctgcagacggcactccgatggagctgtccggttcggatgacgacgagttcgaccag
gccggtgcctcactgggcatcaacctgtctcgcgacgagcgttccgacgccgacatcgcc
taa
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