Cherax quadricarinatus (Australian red claw crayfish): 128690546
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Entry
128690546 CDS
T09502
Symbol
Not1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128690546 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128690546 (Not1)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128690546 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128690546 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
NOT1_connector
DUF3819
CNOT1_HEAT
CNOT1_1st
Zip
NatA_aux_su
PRC2_EED_ins
TCP
TPR_TTI1_C
DUF7813
CobT
Paramyxo_ncap
Motif
Other DBs
NCBI-GeneID:
128690546
NCBI-ProteinID:
XP_069945901
LinkDB
All DBs
Position
29:complement(27267556..27729711)
Genome browser
AA seq
2580 aa
AA seq
DB search
MWTLIKSKLWDMDLSSNPKISSAIKQVWEGIDSSTLQKLPLWAEAAGMQVVRQFGGEAER
HLYRVLIGHLEWSGPQGGESHRPSPNNNNNNNNNNNNNNNNNKDKEVTTGVGVATLTWSS
TSGGASALLQHFTATLPPTSLFANLAFATAYPYNPSKLVKPQWVTGVCKALKLSRLQEIT
FCLHLLQTTNLEVRNQSTALLKAKLPDLVRAYVDTESGDRELLELSTESLHLLLTHIVHL
WRDPPTALLPQESRQAFISTLQREFPRSRVPVVLAPLLYPDSDIPMEKITQEPPANMAKN
LLDGSLADLVLELGYSFCNTVEECRNNLANFGVSSITPAAVAKVLGVMVRTHTGLPSEQI
GLQNLNSPSSLWSDNKDKAPNNQSQTAPANEVGLGGSGNLSCPHGWNVEIFIKGLLEVVP
SINSKEITMKLDHRGFLVKDRQGLKLLITALRCLLQGQGLRWEVFPVDYFYHQWKNSEEQ
LNLITQILKAPEIFCFLDFPCILVSTDCLKTLPELDNKEVATWKSVHLLETLLCLGESGH
LTAVKELFKFPIQHCPDILVLGLVQVTLPYTMLRQDLIASLIPIFLGNHPNAAIILHHAW
HTQNQSSAVRPIIMHAMAEWYMMVENDQTRLSRILDVAQDLKALSLLLNAQSFPFVVDLA
CLAYRREFLKLDKWLTDKIREHGEPFISSCIKFLQRRCPQLMGGKEDIMPKSSQLPNETM
TTILLCLNACAINVSQELSDTILQMVQNCNLINRSRPQQVGVIGFPGPGPTQSNEGPLGN
IASSLSNLSLGGTGVSSSIFPTPPSSSMSLGGLGSLGTAPGSPGRPLGPSTAPGTSQSPL
SSILPALQLGPPHPAAVGSQLPTLPTSSIIPSSLRSHSVQPSVAPARQMDISQIFDMPQL
VSKEVEDEANSYFQRIYNHPPHPTLSIEEVLDMLKKFHESTNKREREVYSCMLRNLFEEY
RFFPTYPDKELFTTARLFGGIIEQGLVEYMALGVALRYVMEALQKPHASKMYYFGIVALD
RFRSRLKEYPRYCQHLMAIQHFSEFPPHLIEYIKYGTQSQEPPSRPSGVVLPPSINISPS
TPAPGPSSSVVTAAATPVGIPPPPVVSTVVSSVAKTITSTTTTTTTAAVSKPQTIAATSV
AVGSGKQQPTITTTNIETLLVATEKEEKITPPPEHIQDKVAFIFNNLAQVNLPQKCEELR
EVVGEEYWLWVAQYLVMKRASIENNFHTLYSLFLDQMKMNNVNAMVCRETLRNIKVLLRA
DKSAANYSDKSLLKNLGHWLGMLTLAKNKPILHTDIDMKSLLIESYNKGLQEMQYVIPFV
AKVMESCAKSRVFKPPNPWTMAIMNVLAELHKEPEMKLHLKFEIEVLCNKLEINLEELKP
ANVLNDRDRIARLKPQLSQPGGSKRAESTPLLPALPGFSSTTFMPKTSWSQVVPPCPVVE
TSTVTAQSSSVGATPTPPTVLPPHPSTTPTPIQAQQQPASEPRFVYSNINVTSLRGLDPH
VSVSVPQVCGIANNAQLKQLVRHAVDLAVQEIVAAVMERSIKIAITTAEHIIKKDFALDP
DESRMRAATHHMVRNLTAAMAMITCRDYLATNITKNIKQGMLQAFSRANQQQLPQQMDQM
DQLAAALSQENVGIACAFIQKTAAEKAVTEMDKRLSQEYEARKVARTDGRRYCDPMVLTY
QAERMPEPIRLKVGGVTQPQMAVYEEFARNIPGFLPITDQDTMFLAKPVPISSQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPPPHT
QQTFGSEEATAFLVLTERISAELEHTIQAFTTLAPTSPLIPMLHSLREGLLLTRTNRDAH
AAQMLLRKCVENLMEGARELPSEPELNQLALRFRDCHLIVLKAMADHRSYGMIWTSKNLT
KCWAEARDEIKYNLDVGDWFIRSNLFNLQLLDEHLARTLEDPRVHSYIPSIFVMQLVQVY
LIDDPSNSVLSETDLQLTLEALVRICHSRQAPDGLVSLIEALRMKHDLLSSERLTGGNSL
SGSNTPLSAGPSLHFHSGVTQARDFQDPPALQEKTEVLLREWIQMYHSPTAGQGSASAFQ
HFVKQMNLHGILKTDDLITRFFRICISMCRDLCVRSILEQGQGPSPTYVRSKCFQNLDAF
VRLIALLVKHSGEATNPTTKINLLNKVLGLVCGIMIHDIESNGTEFQQLPYHRILIMLFL
ELNAPEAILESINLPVLMAFTQTLHLLRPSKCPGFAYAWLEIVSHRVFIGRMLAITPQQK
GWSMYSMLLADLFTFLAPFLRNAELAKPLTMLYKGTLRVLLVLLHDFPEFLCEYHYGFCD
VIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLPEITVSPKIHTTVASLIQPPEFKK
NLDSYLKNRTPVTFLSDMRTYLQVSNEPGMHYNMSVMNSLVLYVGMQAIAQINSKGLTPS
MSTIAHSAHMDIFQNLGVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLHLFAEANTE
AIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPSFKFWSHEFVKCAPEIEKTLSCCMI
NT seq
7743 nt
NT seq
+upstream
nt +downstream
nt
atgtggacccttattaagtctaagctttgggatatggacctctcctctaaccccaaaatc
tcaagtgccataaagcaggtgtgggagggtattgactcttcaaccctccaaaaactaccc
ttgtgggcagaagcagcaggaatgcaagtggttcgtcagtttggtggagaggcagagcga
catttgtaccgggtactgattggtcacctggagtggtctggacctcagggaggagaaagt
catcgaccctcaccaaacaacaataataataataataacaataataataataataataat
aataataaggacaaggaagttacaactggtgttggtgtagccactcttacgtggtcatcc
actagcggtggagctagtgctcttttacaacacttcactgctacacttcctccgacatct
ctttttgcaaatcttgcatttgccactgcatatccatacaatccaagcaagcttgtcaag
ccacagtgggttactggagtgtgcaaggcactcaagctttcccgcttgcaggaaattact
ttttgtttacatcttcttcaaacaacgaatttagaagttcgtaaccagtccacagcactc
ctcaaagccaaacttcctgatcttgtacgagcttacgtagacaccgaatcgggggaccgg
gagttgttggagctatcaacagaatccctgcacctgttgctaactcacattgttcatctt
tggagggatccacctactgcactactacctcaagagtcgaggcaggccttcattagcact
ctacagcgagaatttccccggtcacgtgtccctgtggttcttgctccactactttaccca
gactctgacattcctatggagaaaataactcaagaaccacctgccaacatggcaaaaaat
cttcttgatggttcattagctgatctagtcttagagttaggctatagtttctgcaatact
gtggaagaatgtagaaacaatctggccaattttggggtgagttccataaccccagcagct
gtagccaaggtcttgggtgttatggttcgaactcatacgggtttaccatctgagcagatt
ggacttcagaacctaaattcacccagctcactgtggagtgacaataaagataaggcccca
aacaaccagtcacagacagccccagcaaatgaagtgggtttgggtggatcaggaaatctt
tcttgtcctcatggttggaatgtagaaatttttatcaaggggctccttgaagttgttccg
agtattaatagtaaagagataactatgaaattagatcacagaggattcttagtaaaggac
agacaaggcttaaagctgctaatcactgctctcagatgtcttcttcaaggccaaggctta
aggtgggaagtgttccctgtggattacttctatcaccagtggaaaaacagtgaagagcaa
ctaaatcttattacacagattctcaaggctcctgaaatattttgtttccttgattttcct
tgtatcttggtgtcgactgattgccttaaaacactgccagaacttgataacaaagaggtg
gcaacatggaaatctgttcatctactggaaacccttctctgccttggtgaatctggtcat
cttacagctgtcaaggagctgttcaagtttcccatccaacattgtccagatatcttggtg
cttggcttggttcaggtgactcttccatacaccatgttgcggcaagatctgattgcttca
cttattccaatcttccttgggaatcacccgaatgcagcaatcattctacaccatgcttgg
cacacacagaatcaatcaagtgcagttcgtccaatcataatgcacgcgatggcagagtgg
tacatgatggtggaaaatgatcagacaagactcagccgtattttagatgttgcacaagat
ctcaaagccttatcacttctcctcaatgctcagtcatttccctttgtagtggatttggct
tgtttggcatacagacgtgaatttttaaagttggacaagtggctgactgacaaaattaga
gaacatggagagccctttatatcctcttgtataaagttccttcaacgaagatgtcctcag
cttatgggtggtaaagaggacataatgccaaaatcttcacagctacctaatgagacaatg
actaccattcttttgtgcctgaatgcatgtgctataaatgtctctcaggaactgtccgac
actatactgcaaatggttcaaaactgtaatttgataaatagatctcgtccacaacaggtg
ggagtgattggattcccaggtcctggtccaactcagtcaaatgaaggaccattaggcaat
attgcttcaagtttaagtaacttgagtcttggtggtactggtgtgtcttcctcaatcttt
ccaacgccaccttcatcatcaatgagtcttgggggattagggtcacttggtacagctcca
ggttcccctggtcgtccacttggtccctccactgctcctgggacctcacagtctccactc
tcttccattttacctgctctacagttgggaccaccacatcctgcagcagtgggatctcag
cttcccacactaccaacttcatccattattccctcttctctaagatctcattcagtacag
ccaagtgttgcacctgccagacaaatggacatctcccagatatttgacatgcctcagctg
gtgagcaaggaagtggaagatgaagcaaatagctactttcagcgtatttacaaccaccct
ccacatcccacactctcaattgaagaagtattggatatgctgaagaagtttcacgagtct
actaataagcgagagagggaagtatattcctgcatgttgcgcaatctatttgaagagtat
cgcttcttcccaacgtacccagacaaggaacttttcactactgcaaggctttttggtggt
attattgaacagggtctagtcgaatacatggctttaggagttgcattgcggtatgtaatg
gaagctctccagaagccacatgctagcaagatgtattacttcggtattgtggccttagat
aggtttcgtagtcgtctgaaagagtatcctcggtattgtcagcacctcatggcaatacag
catttcagtgaatttccaccacaccttattgagtacatcaagtatggaactcaatcacaa
gagccaccttcacgcccttctggtgttgttctacccccatccataaatatttcaccaagt
acacctgctccaggaccatcatcatctgtggtgacggctgcagcaacaccagtaggaatt
ccaccaccaccagttgtatccacagtagtatcatcagtggccaaaaccatcacatctaca
accaccaccactactactgctgctgtcagtaaacctcagacaatagctgctacttcagtg
gcagttgggtctggaaaacaacagccaacaataactactaccaacatagaaactctgctc
gttgccacggagaaggaagaaaaaatcactcctcctcctgagcatatacaagacaaagtt
gcctttatcttcaataaccttgctcaagttaaccttcctcaaaagtgtgaagagttacgt
gaggtagtaggtgaagaatattggctatgggtggcacagtatttggtgatgaaacgtgca
tccatagagaacaactttcatacactgtattctctatttctggatcagatgaaaatgaat
aatgttaatgccatggtctgtcgggagacactcaggaatatcaaggtactcctaagggct
gataaatcagcagctaattattctgacaaatctctattgaaaaatcttggccattggtta
gggatgctcaccctggccaagaataaaccaatactgcatactgacatagacatgaagtca
ctactcatagaatcttacaacaagggattgcaggagatgcagtatgtgattccattcgtg
gctaaggtgatggaatcctgtgccaagagccgagtgttcaagccgccaaatccatggacc
atggctattatgaatgtattagctgaacttcacaaggaaccagaaatgaaactacatctt
aaatttgaaattgaggtgctatgtaacaagttggaaatcaatctggaagaattgaagcct
gctaatgtgttgaatgaccgagaccggattgcccgccttaaacctcagctgtcacagccg
ggtggatctaagcgagcagagtcgactcccctattaccagctctgccaggtttttcgtct
accacctttatgccaaagacgagctggtcacaagttgtgccaccgtgtcccgttgtagaa
acaagtacggtaactgctcagagctcctcagttggtgccacacctacacccccaacagtc
ctgcctccacatccctccaccacacccacacctatccaggctcaacagcagcctgcctca
gagccacgttttgtttattcaaacataaacgtaacatccctcaggggtctggatcctcat
gtatctgtctctgtacctcaggtttgtggtattgcaaataatgcacagctaaaacagtta
gttcgtcatgctgtagacttggctgtccaagaaattgttgctgcagtaatggagcgtagc
atcaagattgccatcaccactgctgagcacatcattaagaaggactttgctctagatcca
gatgaatctcggatgcgtgctgcgacacaccatatggttcgaaacctcacagcggcaatg
gcaatgatcacttgtcgagattatcttgccactaacattaccaaaaatatcaagcaggga
atgctgcaagcattttcaagagcaaaccagcaacaattgccccagcaaatggatcagatg
gaccagttggctgctgcactcagtcaggagaatgtaggcattgcctgtgcatttatccag
aaaactgctgctgagaaagctgtaactgaaatggacaagagattgtcacaggaatatgaa
gctcggaaggttgcccgaacagatggacgacgttactgtgatccaatggtattaacatat
caagctgaacgtatgcctgagccaatacgtttaaaagtgggtggtgtcactcaacctcaa
atggctgtgtatgaggaatttgctcggaacatacctggctttttacctattaccgatcaa
gatacaatgttcttggcaaaacctgtgcctattagctcacagcagcagcaacagcagcaa
cagcagcagcagcaacagcagcagcagcaacaacaacaacaacaacagcagcagcaacag
cagcagcagcaacagcagcagcaacaacagcagcagcagcagcagcagcagcaacagcag
cagcagcaacagcagcagcagcaacaacaacagcaacaacaaccaccaccacctcacaca
caacagacatttggtagtgaagaagcaacagccttcctggtgctaacagagaggatcagt
gcagaattggaacacactatacaggctttcactactcttgcaccaacatctccacttata
ccaatgcttcactctttgcgtgaaggacttttgcttacaagaaccaacagagatgcccat
gctgctcaaatgctacttagaaagtgtgtagaaaatcttatggaaggtgcacgggaatta
cctagtgaacctgaactaaatcagttggctttgcgctttcgagattgccacctcatcgtt
cttaaagctatggctgatcaccgctcttatggtatgatctggacatcaaagaatcttaca
aaatgttgggcagaagcaagggatgagataaaatataacctggatgttggagattggttt
atccgctccaacttgtttaaccttcagctactggatgaacatcttgcaagaacccttgaa
gatcctagagtacactcctatatcccttctatctttgtgatgcaactagtccaggtatac
cttatagatgacccaagcaatagtgtgttaagtgaaactgacctacaattaaccctggag
gccttggtgcgtatatgtcattctcgacaagctcctgatggtcttgtttcactgattgag
gcactacgcatgaagcatgacttattaagcagtgaacgtttaactggaggaaacagcctg
agtggctctaatactccattatctgcaggacctagtcttcactttcattcaggtgttaca
caagccagggattttcaggatccaccagctttacaagagaaaactgaagtattattgaga
gaatggattcagatgtatcattctcctaccgcaggccagggttctgcatcagcttttcag
cattttgtcaagcaaatgaatcttcatggaatccttaaaactgatgatctcattaccaga
tttttccgcatttgcatcagcatgtgcagagatttgtgtgttcgttccatcttggaacaa
ggccagggcccatcacctacttacgtacgaagtaaatgtttccagaacttggacgcattt
gtgcggcttattgccttattagtcaaacactctggtgaagctaccaaccctactactaag
ataaatctcctcaataaggttttgggattagtttgtggcatcatgattcatgatattgaa
tcaaatggcacagagtttcaacagttgccatatcatcgcatccttattatgctgttcctg
gaactcaatgctcctgaagctatcttagaatcaatcaaccttccggtattgatggccttt
acgcaaacattacatctgttacgccccagtaagtgtcctggctttgcttatgcctggctg
gaaattgtgagccatcgagtgttcattggccggatgttggctattacaccacaacaaaag
ggatggtccatgtactccatgttgttagcagatcttttcacatttttagcacccttttta
aggaatgctgaattagccaaaccactgacaatgctctataagggtaccctacgtgtgctg
ttggtcctcctccatgactttcctgaattcttatgcgaataccactatggattctgtgat
gtcatccctccaaattgcatccagatgcgtaatctcattctgtctgcctttccacgaaat
atgcgccttccagatccttttacaccaaatctcaaagtagacatgttgccagaaattact
gtatcacctaagattcacactactgttgccagcctcattcaacctccagaattcaagaag
aatttagattcctatctaaagaacaggacaccagtaacatttctctcagatatgagaaca
tatttacaggtatccaatgaacctgggatgcattataacatgtctgtgatgaactccctg
gtgctgtatgtaggcatgcaggctattgcacagattaatagcaagggtctcactccctcc
atgtccacgattgctcattccgcccacatggacatattccagaatcttggtgttgatttg
gacacagaaggtcgatacttgtttttaaatgctattgccaatcagttgcgatatccaaat
agccacactcattacttcagctgtactctactccatctctttgctgaagctaacacagaa
gctattcaagaacaaattaccagagttcttctggaacgacttattgtcaatcgtcctcat
ccatggggactactaattaccttcattgaactcatcaagaatccttctttcaagttttgg
agtcatgagtttgtaaagtgtgctccagaaattgagaagactctcagctgctgtatgata
taa
DBGET
integrated database retrieval system
