Cherax quadricarinatus (Australian red claw crayfish): 128691564
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Entry
128691564 CDS
T09502
Symbol
Nup188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128691564 (Nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128691564 (Nup188)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128691564 (Nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Utp13
CYYR1
Motif
Other DBs
NCBI-GeneID:
128691564
NCBI-ProteinID:
XP_069944969
LinkDB
All DBs
Position
26:complement(20521002..20608347)
Genome browser
AA seq
1633 aa
AA seq
DB search
MENIEIVSGKALWGVICGTYVLPSDEVVGVELQLAAPHLRAGLAAFTKPSGDHYTKWSQT
AEATQSEKDFVKKLSQLLDLSASHSWEMFQLFLLHEYRGAEVALTEVLANQRDEETFMAQ
LWNFYLGDRLHLLRCLRHIVANTSNPQHPYQNLFSDFMRDVLDKDGKLWESLVEQVMLCT
RMVPPTIQTHGPHFPSGGLHTWLAHHLAELREVLATLLVYYGSTSHSPTPDTFQKLVQLA
QGGGLGGRHEIQEGLRNSHGPLVEALDAIHMLLLMLVINADSPTSGHSLCDSGWVSKLDP
IMAGLGARTPHLAPLLAWAVLQLRAAGPTSSAHPKIYNKLAQRALHGNVFGYLQTALNNT
VIKGDELLLRLASSVVYSLVCAAAGSLDLDRMGCLPVLNSLAKICLAQDPPAYLFWAEEG
GGAGLLLPQALEVFPHDVEPLLSLATALALANPESCHKVVELLSELPNITWIIPDCEAEN
IQIRGGNCFATASLYLLPSVMVPAHTSGVLLSTNPIIVAWQMPTNAWQALLAIMKLLDNE
VSGGASLPDPRLMTAVSATMRLLSSVLTTVPSHLPALVHFVNQSVGLLCRVSQVSRPPGE
LVAALLEFLAEVATQKPKQVWAELEGSPLLPFLSTPQSAGFKRGKADPFIGYRAGGLRAL
VCGEEAATGRYPILCSYTGLLTAAIKGGVSSGSVRGGIVFMAREVAGTLLRWCYISQEER
ETVLDRCLALLHHTLEGSNMDSCVRDLVVRQLVDRSSAGQTLLSVVVSGASLELALNHPT
HSPISTHAHRLTRTAQMALSILHRLVGEDSSMGGLSQLLRAAPSLGVTLGGGGHSQGSGS
PPHLALTVALYAHQRLNPRLSYLALRTLTRFAQKLDVPLVACFGGEADGIRDALLRRLDS
ATEDVRVKVALLRLLTSSTTRQQGLTNAFLTPPEKLLDPLISLATPSARNESGRELILAI
VELLDALWSEKYTTATVYLQDKEDFWKALIHPLTTERPGEVSDAVVGHALRVFAQQLFSS
NGKPCGPLKSAMDQLCQPDTGTLSQWSKHIVTSLETGTVPSKNVSELLLPAWRDFLVVLV
ARAKSWLTNDQKVNLASDILHVLLHQLELESVDEPLTILLAELHLSLVKHCGKQLAEKAD
IFITIGKLLVLVQGAVMSTPAHCQMLILAAALRMATLTQVSHQSQGQVLPLLNPVVGLVQ
QHGRLAGSKLHSCTSAATLSLATALLHQCLLRCQDETAQQHLAYCPVVPSLLHAAEIYMK
NGEEEVVGELLRLLATLSRISQLSEELSTHTLSSTLTLVIPPSKTSLLSEVVWGVVWGVM
REGVGGVEGGVNVAAVHLSALSGSLAAPHRQPGLALATAALVTALAPHSSLWIVMHPASH
SQLTAATTRCIHLTTHLLCTPRVVQMELSGEKSSSGGTAPLSTPAAVESSVASTTANISA
NTTAVLNQMLQVLCACLGAIGSLGPNLTDLLCGPGIDVGAWMLFFHPSFRPVSAHDPSAQ
PSLASLTSVLDLYDNHASRESRGVSPCRGGVPEVGLCLRVLAICAEQALLLLLTQATLAL
MSPETPPRDAVRVRHGLADEMNSFFMRWLGRRPAVSPLPTTSTGVFGVGSSVHIDLTYLR
LAQQLIGRLGATK
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggagaatatagaaattgtgagtggaaaagctctgtggggtgttatatgtggcacttat
gtgctgccatcagatgaagttgtaggtgtagaactacagctagcagcccctcaccttcgt
gctggcttggctgcttttacgaaacccagtggtgatcattatacaaaatggtcacaaact
gcagaagccacacagtcagaaaaagattttgtcaagaagctctctcaactgctggatttg
tcagcatcccatagttgggagatgtttcagttgttcttactccatgagtatcgaggtgca
gaagttgcattaacagaggtgttggccaatcagcgtgatgaagaaaccttcatggctcaa
ctgtggaatttttatcttggtgatcgtctacatcttcttcgctgtttgagacacattgtt
gcaaatacatcaaatccacaacatccttaccagaatttatttagtgacttcatgcgtgat
gttttggacaaggatggtaaactttgggaaagtctggtggagcaagtgatgctttgcacc
agaatggttccaccaaccattcagactcacggtccacactttccatctggcggccttcat
acctggcttgcccaccacttagcagagctaagggaagtactggccacactcctcgtgtac
tatggcagcacttctcactcgccaacaccagacacatttcagaaacttgttcagctagca
cagggaggagggcttggtggacggcatgagattcaagaaggattacggaacagccatgga
cctctggtggaggctcttgatgctatacacatgcttcttctcatgcttgtcattaatgca
gattcccctacaagtggtcatagtctttgtgacagtggatgggtcagcaagcttgatccc
attatggcagggcttggggctcgaacaccacaccttgctccattattagcctgggctgtg
ctgcagttaagagcagctggtccaacatcctcagctcatcctaagatatacaacaaactt
gctcaacgtgctcttcatggcaatgtttttggctacctgcaaactgctctgaataataca
gtgattaagggagacgagttgctgctacgtcttgcatcatcagtggtatactctttggtg
tgtgctgcagctggttcccttgacttggacaggatgggctgcttgccggtcttaaattct
ttagctaagatctgcttggcacaagatcctcctgcatatctcttttgggctgaagaaggt
ggaggagctggtttgttgttgccacaggcattggaagtattcccacatgatgttgagcca
ttactctccctggcaacagctctggcactggcaaaccctgagagctgtcacaaggtggtg
gaactccttagtgaacttcctaatatcacttggattatcccagattgtgaagctgagaat
attcagatacgagggggtaattgttttgctacagcttctctctacctattgccaagtgtg
atggtgccagcacacacaagtggagtgctgctctccactaatcctataattgtggcttgg
caaatgccaacaaatgcctggcaagctttacttgccatcatgaagctgcttgataatgag
gtgagtggtggggcaagtcttcctgaccccagactaatgacagcagtgtcagctaccatg
cgactcctctcttctgttttaacaactgttcctagtcacctgccagcattagttcatttt
gttaaccagtctgttggattactttgtagagtgtcacaagtgagccggccccctggagaa
ctggtggctgcattgctggaattcttggctgaagttgctactcagaagcccaagcaagtg
tgggcagagcttgaaggtagcccactgctgccattcctgtctacaccgcagtctgcagga
tttaagagaggcaaagcagatccattcattgggtatcgtgcaggaggcctccgtgcttta
gtttgcggagaagaggcagccactgggaggtacccaatactctgctcctataccggcttg
cttactgctgctatcaagggtggtgttagcagtggtagtgttaggggtggcattgtgttc
atggccagagaagtagcaggtactttgctacgctggtgttatatcagccaggaggagagg
gaaacagtacttgatcgctgcttagccctccttcaccatacacttgaaggatctaatatg
gattcttgtgttcgtgatctagttgtaaggcagcttgtcgacagaagcagtgctggtcag
acgctgctgtcagttgttgtgagtggagctagcctagagttagccttgaaccacccaaca
cattctcccatctcaacccatgcacacagattaactcgcacagctcagatggctctctcc
attctccacaggctggtgggtgaagacagcagcatgggtggccttagtcaacttcttcgt
gctgctccttctctcggagtgaccctgggaggtggtggacactcgcagggaagtggcagt
cctccacacctggctttaactgtggctttgtatgcccatcagcgacttaatcctcgactt
tcctacttggctctgcgcactttaacacgatttgctcagaaactggatgttcctctagtg
gcatgttttggaggtgaggctgatgggattagagatgctcttttgcgtcggttggattca
gcaacagaagatgtgcgagtaaaagtggctttgttgcgcctcctaacttcttctacaaca
cgccagcagggacttacaaatgccttcctcaccccacctgaaaaactgctggaccctctt
atttctcttgctactccatctgctaggaatgagtctggacgagagcttattctggcaata
gtagaacttttagatgccttatggagtgagaaatacacaactgccacagtgtaccttcag
gataaagaagatttctggaaggctctcattcatccacttactactgaaagaccaggtgaa
gtaagtgatgcagtagtaggtcacgcactaagagtgtttgctcaacagctgttctccagt
aatggcaaaccttgtggacctctcaaatcggctatggatcaactctgtcagcctgacact
ggcacgctttctcagtggtcaaagcacatagttacgagtctagaaactggaactgtgcca
agcaaaaatgtgagtgaattgttactaccagcttggcgggactttcttgtggtgctagta
gcccgcgctaaatcttggctcaccaacgatcagaaggtaaacttggctagtgatattctt
catgtgttgcttcatcaacttgaactagagtcagtagatgaaccactgacaatcctattg
gccgagcttcatttatctctggtcaaacattgtggaaagcaattagcagagaaagcagat
atttttattacaataggaaagctgctggtcttggtgcagggggctgtgatgtcaacacca
gctcactgtcaaatgttgattctagctgctgcattaagaatggctacactcacccaagtg
tcccaccagtcacaaggtcaagttttacctttgttgaatcctgtggtgggtttggtgcag
caacatggtagactggcagggtcgaagttacacagttgtacttctgcagccacattaagc
cttgctacagctctcttacaccagtgtctcttacgctgccaggatgagactgcccaacag
cacctagcttactgcccagtagtgccctcgctcctccatgctgctgaaatctatatgaag
aatggggaggaagaagtagtaggggaattactgcgtctactggccacgctctcccgcatt
tcacagctttcagaagaactctccacacatactctttcatcaactctaacattagttata
ccaccttcaaaaactagtctgcttagtgaagtggtgtggggagtggtgtggggtgttatg
cgtgagggtgttggaggagtcgaaggcggggtgaatgtggctgctgttcacctttcagca
ttaagtggatcattggcagctcctcatcggcagccaggtcttgctttagcaacagcagcc
ctagtaacagcactagccccacattcttcactttggattgttatgcacccagcatcacac
tcccagttgacagcagccactactcgttgcattcacttgacaacacacttgctctgcaca
ccaagggtagtacagatggagttaagtggggagaagagcagtagtggaggtacagcacca
ctgtccacccctgctgctgtagagtcctctgttgcatctactacagctaatatttctgcc
aataccactgctgttctcaatcagatgttacaggtgctatgtgcctgtcttggtgccatt
ggctccttaggtcctaatttaactgaccttttatgtgggcctggaatagatgttggagca
tggatgctcttcttccatccatctttccgtccagtgtctgctcacgacccaagtgctcag
cccagtttggcttcgcttacatctgtacttgatctttatgacaatcatgcttcaagggaa
agtcgtggagtatctccatgccgtggtggcgtacctgaagttggcctgtgtcttcgagtg
ttagctatttgtgcagagcaagcgctcttgctgctacttactcaggctaccttagcatta
atgagtcctgaaactcctcctcgagatgcagttcgagttcgtcatggactagcagatgaa
atgaattctttctttatgcgatggttgggtcgacgtccagcagtatcacctctaccaacc
actagcactggagtatttggagttggcagttcagtgcatatcgatttaacatacctacgc
cttgcccagcagcttataggaagacttggtgcaactaaatga
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