Cherax quadricarinatus (Australian red claw crayfish): 128691606
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Entry
128691606 CDS
T09502
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128691606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128691606
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
128691606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_CcmH_CycH
TPR_16
TPR_19
TPR_8
TPR_17
TPR_14
TPR_2
TPR_11
TPR_12
TPR_9
TPR_7
ARM_TT21_C
ARM_TT21
TPR_6
ANAPC3
NatA_aux_su
TPR_Slam
FAT
DUF6584
Coatomer_E
TPR-S
COG4_N
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
128691606
NCBI-ProteinID:
XP_069945055
LinkDB
All DBs
Position
26:8470723..8759351
Genome browser
AA seq
1106 aa
AA seq
DB search
MADFKNALREAKKAMKENDFESVSKYCKIALKHDRKNYNALLLFGRACQELGKLEDSKKA
LMMATQVDPESPVAWQGLAVLCEKQPSITTREESITIYTRIIDIIKNDEEKIDNAFRKLA
TLQLEKEGYVSAAATLRMLAHRVTDKNKIRDAWQSIAQILSGVKDLPEEHAPKLQEALQH
LLNESVLGDNESNYQIYLRLLYRTKQLTNLVVAAQKMATIFPTYYPLEWICRMYVEMTAT
PNNEDEFPLSKEDISEYVTKLLRLNKASPWGNLAQGIIYLLDDHHVEAKAHLRVGAERVG
NNLLGWSILLKLQEASNDWAGVEVTCKRSLKIMEDDPNVTVPDNEEFEEYWTKLLLTQAK
AYVHMGHKNHLHQAVTLLEEYACTSLDCGVLLIKSRIKLQEFDLAEDDLEKLEEAFGEEF
KLKLVSACLYRAQGKRQEAFQILDELVQEHPECAEAHLELGRVYFEKGDLKNAQISCMRA
GKLDSKLGQAFLYLGHIFRRQDVMEKAVKCYEKSLSLNPCDDETGAALSDIYRILGKYEA
NIHLLHRVTSEGGRSSCGWAWLRLGLHHLALHGYDQAIQAFQCTLKINPDDSATYECLGD
AYLARGAHTAALKVFTYASQLNPGALYPLYQIAHIKQITGENLEAIRDYEAVLKREPIKP
VEVVSLIGLAEALIAIARKYYEQFFHANVKDACLRAITALMKAASIKPESSCIWKLMGDA
CTLLHPVPASLAKFTVPAKLIQKEIKDLDEMTVVDKLQILQMGARCYGVALQIGDDAALW
HDLGVNTYLQGKVMEANNKGGDEAAIKDLMDRSVMALRKSLSLDPLNGMNWNSLGIIAAH
KILGEYALAQHALIKACECQPSAVTWTHLGAFYLTHNESHLAHEAFSQAQALDPSFITCW
VGQALVAESVGHSEAFDLFRHTTLLGIHLESCIGYTHHVMELACDAKKQSNVRTQHVIQQ
AIPPATDSMVFYSREKEEDVVGLNMAGLTLEMMGLYQSAVKAYENSLYTVQNDKDAVTSV
MATLGFEASIRRKIKSKTSLKQAQRAVLMCPGSPEAWAMLVAAQLAAGHTQTQVHLGPLA
RILSQEGSPQISSWLQTMSTRLIQVA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttcaagaatgctctgagggaagccaagaaggctatgaaggaaaatgacttt
gagtcagtcagtaaatattgtaagattgctcttaaacacgatcgcaagaactacaatgct
ctgttgttatttggtcgtgcatgtcaagagctgggcaaattagaagattctaagaaagca
ctcatgatggctactcaagttgatcccgagagtcctgtagcttggcagggtcttgcagtg
ctgtgtgaaaaacagccaagtatcactaccagagaggagagtattactatatatacaaga
attattgacatcattaaaaatgatgaagagaaaattgataatgcattccgaaaattagca
acactgcagttagaaaaagaggggtacgtcagtgctgcagccaccctccgaatgcttgcc
cacagagtaactgataaaaacaagatcagggatgcgtggcagagcattgcacagattctc
tcaggagttaaggacttgcctgaggaacatgctccaaagttacaagaagcattacaacac
cttttgaatgaatctgtgttgggagacaatgaaagtaactaccagatatatttgcggctc
ttatatcggacaaaacagttgacaaaccttgttgtagctgctcagaaaatggctacaatt
ttcccaacatattatcctctagaatggatctgccgtatgtacgttgaaatgactgccact
ccaaataatgaagatgagttcccattgagcaaagaagacatcagtgaatatgtaaccaaa
ctcttgaggctgaacaaggcatcaccttggggtaaccttgcacaaggaattatttacttg
ctagatgaccaccatgtcgaggctaaggcacaccttagagtaggtgctgagcgtgttggg
aataatcttcttggatggagtatacttctaaaacttcaagaagcatctaatgattgggct
ggtgttgaagtaacatgtaagagatctctcaaaataatggaagatgatccaaatgttaca
gtacctgataatgaagaatttgaggaatactggacaaagttgttgctaacacaagccaaa
gcttatgtacatatggggcataaaaatcatctgcatcaagcagttactcttctggaggag
tatgcatgcacaagtttagactgtggtgtgctgttaatcaaatccagaatcaagttgcaa
gaatttgacctggcagaagatgaccttgaaaagttggaggaggcctttggagaagagttt
aagttgaagctcgtctcagcttgtctttatcgtgctcaaggaaagaggcaagaagcattt
caaatcttggatgagcttgttcaggaacacccagaatgtgcagaagctcacctggagtta
ggtcgagtgtattttgaaaaaggagatcttaagaatgctcagataagctgcatgagagct
ggaaaactggattcaaaacttggacaagcattcttgtatttgggacacatattccgtcgc
caggatgtaatggaaaaagctgtcaagtgctacgaaaaatctttatctttgaacccttgt
gatgatgaaactggagcagcgctgtcagacatatatagaattttagggaaatatgaggcc
aacattcatctgttgcaccgtgttacaagcgagggtgggcgttcctcatgtgggtgggcc
tggctcaggcttggactgcatcaccttgcattgcatggctatgatcaggccattcaggca
tttcagtgcacactcaaaattaatccagatgatagtgccacctatgagtgcctgggagat
gcctacttggctcgtggtgctcacacagctgctctcaaggtgtttacttatgcatcacaa
ctgaatcctggagcactgtaccctctgtaccagattgctcatattaaacaaataactgga
gagaaccttgaagctataagagattatgaagctgtactcaagcgtgagcctataaaacca
gttgaagttgtgtcactgattgggctggctgaagctctcatagccattgcaagaaagtat
tatgaacaattttttcatgcaaatgtgaaggatgcatgcctccgtgccattactgctttg
atgaaagctgccagcataaagcctgagagttcatgtatttggaagctgatgggtgatgct
tgcactctgcttcacccggtgccagcctcacttgctaagtttacggtacctgcaaagctg
atccaaaaggaaattaaagatttagatgaaatgactgtggtggacaaacttcagatattg
cagatgggtgccaggtgctatggggttgctcttcaaataggagatgatgcagctctctgg
catgatttaggagtcaatacatatctgcagggaaaggttatggaagccaataacaaagga
ggtgatgaggctgccattaaagacttgatggaccgttctgtcatggcactaagaaaaagc
ctatctctggatcctttaaatgggatgaattggaattctcttggcattattgctgctcac
aaaatattgggtgagtatgctttagctcagcatgctttaatcaaagcctgcgagtgccag
ccaagtgctgtcacgtggactcaccttggggcattttacttgactcacaatgaatctcac
ctggctcatgaagcattttcacaagcacaagctttggatccttccttcattacttgctgg
gtcggtcaggctcttgttgccgagagtgtgggtcattctgaagcatttgatctcttccgt
cacacaactttgcttggcattcatttagaaagttgcataggctatacccatcatgtgatg
gaactggcatgtgatgcaaagaagcaaagtaatgtgcggactcaacatgtcattcaacaa
gcaattcccccagcaactgactctatggtcttctattctcgagaaaaggaggaagatgtt
gtggggctaaacatggcaggcttgacactggagatgatggggctgtatcagtcagctgta
aaagcttatgaaaattcattgtatactgttcagaatgataaggatgctgtaacaagtgtg
atggcaacccttggctttgaagcaagcattcgtagaaaaatcaagagcaaaacaagttta
aaacaagctcagcgagcagtcctcatgtgccctggttctccagaagcatgggcgatgcta
gtagcagcacagcttgctgctggtcacacgcagactcaggtgcatcttggtccactggca
agaattttgtctcaagaaggatctccccagatatcttcttggttacagactatgtcaaca
agattgattcaggtggcatag
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integrated database retrieval system
