KEGG   Chenopodium quinoa (quinoa): 110686051
Entry
110686051         CDS       T05764                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110686051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110686051
   03036 Chromosome and associated proteins [BR:cqi03036]
    110686051
Spliceosome [BR:cqi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110686051
 Complex B
    110686051
 Complex C
   U2 SnRNP specific factors
    110686051
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110686051
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_MROH2B_C TPR_DNAAF5 HEAT_EF3_N HEAT_2 HEAT_ECM29 TPR_IPO5 Htt_N-HEAT_1 HEAT_GCN1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N
Other DBs
NCBI-GeneID: 110686051
NCBI-ProteinID: XP_021718316
LinkDB
Position
Unknown
AA seq 1276 aa
MASIDPEIAKTQEERKKMEQELASLSSLTYDTDLYGSSGREDYVQSIPVDDDEDNADAMD
NEVARKLASYTAPKSLLKEMPGAGADYDDGLRKPQRIIDREDDYRRRRLDRVISPARHDA
FAMGDKTPDVGVRTYADVMREEALRREKEETLRLIAKKKKEEEEQKKSLEEEKGAGGGVA
AQAQPSQKRRNRWDQSQDQQGDEGVAKKAKSSSDWDLADSTPGIGRWDATPTPGRLGDAT
PSARKNRWDETPTPGREQDSDSTPSAGGLTPGATPAGSTWDATPKITGMATPTPKRQRSR
WDETPATMGSATPMAGATPAAMTPGVTPVGGVDLATPTHGQINLRGPVTPEQYNLMKWEK
DIEERNRPLTDEELDSMFPPEGYKILDPPASYVPIRTPARKLLATPTPIGTPLYQIPVED
RNQQFDVGKEPANGLPFMKPEDYQYFQALLNDENEEELSPEEQKERKIMKLLLKVKNGTP
PQRKTALRQLTDKAREFGAGPLFNQILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP
FVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA
RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI
IEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKA
IGFIIPLMDALYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSD
ILPEFFKNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVM
ETIEKVVTNLGASDIESRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPY
LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPE
VLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE
FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQN
RVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYA
VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVIN
AVTEAIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLE
NEGENIYSRPELLMFV
NT seq 3831 nt   +upstreamnt  +downstreamnt
atggcgtcgatagacccagagatagcgaaaactcaggaggagaggaagaagatggagcag
gaactagcctctctttcatctcttacctatgatactgatctttatgggagtagtgggagg
gaggattatgtccagtcaatccctgttgatgatgatgaagataatgccgatgctatggat
aatgaggtggctcggaaattggcttcttacacggctccgaagtctcttttaaaggaaatg
cctggtgctggggctgactatgatgatgggttgaggaagccacaaaggattattgatcgt
gaggatgattatcgaaggaggaggcttgatcgggttatttctcctgcgaggcatgatgct
tttgcaatgggggataagaccccggatgttggtgtcaggacttatgctgatgtgatgagg
gaggaggcgttgaggagagagaaggaggagacgttgcgattgattgctaaaaagaagaaa
gaagaggaggagcagaagaagagtttggaagaggagaaaggagctggtggtggtgttgct
gctcaagctcagccttctcagaagaggagaaataggtgggatcaatctcaggatcagcaa
ggggatgagggcgtagcaaagaaagcgaagtcttcctctgactgggatttagccgattct
acccctggaattggaaggtgggatgccactcccacaccagggagacttggtgatgctaca
ccatctgctcggaagaataggtgggatgagacaccaacacctggccgtgaacaagattct
gattctactccgtctgctggtgggctcactcctggtgccactcctgctggatcgacatgg
gatgccactccaaaaatcactggtatggcaacacctacaccaaaacgtcagagatcaagg
tgggatgagactccagctaccatggggagtgcaacacccatggctggggcaactcctgcg
gctatgacccctggtgtgacacctgttggtggggttgatttggctacacctactcatggg
cagattaatctgcgtggcccggtaactcctgaacagtataacttgatgaagtgggagaag
gatattgaagagaggaacagacccttgactgatgaagagcttgattccatgttcccacct
gaaggatataagatcttggatcctcctgcttcatatgtgccaattaggaccccagcaagg
aagcttcttgccacacccactccaatagggactccactttatcaaataccagttgaagac
aggaatcagcagtttgatgttggaaaggagcctgctaatgggttgccatttatgaaacct
gaggattatcaatattttcaggcgttgttgaatgatgaaaacgaggaagagctgtcacca
gaggagcagaaggaaagaaagatcatgaagttgctacttaaagtgaaaaatggtactcct
cctcagaggaagactgcattgcggcaactcactgacaaagcaagagaatttggtgctggt
ccattgtttaaccaaattttgcctttgcttatgcagccgacattggaagaccaagaacga
catcttcttgtgaaagttattgacagggtgctgtacaagcttgatgagttggttcgacct
tttgtgcacaaaattcttgtggttattgagccactcttaattgatgaagactactatgcc
cgtgttgaggggagggagattatttcaaacttgagcaaggctgctggattggccactatg
attgctgccatgagaccggatattgataatattgatgagtatgtcaggaatacaaccgcg
agggcttttagtgttgtggcttcagctctaggtatacctgctctgctgccatttttaaag
gcagtgtgtcaaagtaagaagtcatggcaagctaggcatacaggtattaagattgtccaa
cagatagccattttgattggttgtgctgttctgccacacttaagatctttggtggagatc
atagaacatggtcttaatgatgagaaccagaaggtcagaacaattactgcactttctctg
gcagctctagctgaggcttcagccccgtatggtattgagagttttgactctgtattgaaa
cctctgtggaaaggtatcagatcacaccgtggaaaagtcttggctgcattcctgaaggcc
attggttttatcattcctttgatggatgctctttatgctagctactatacaaaagaagtt
atgtttattcttattcgagagttccagtcaccagatgaagaaatgaagaagattgttctg
aaagtggttaagcagtgtgttagcactgagggtgtagaggctgactacattagaagtgat
atccttcctgagttctttaagaacttttgggttaggagaatggctcttgacagaagaaat
tacaagcaacttgtggaaactactgtagagatagccaacaaggttggcgttgctgatata
gttggtaggatagtggaggatcttaaagatgagagtgaaccgtataggcgtatggtcatg
gagacaatagagaaagtggtgacaaacttgggggcatctgatattgaatctcgcttggag
gagcttctgattgatggtattttgtacgcctttcaagagcagacaagtgatgatgccaat
gtcatgcttaatggttttggcgctgtggtcaatgctcttggccaaagggtcaaaccttat
ctcccccagatatgtggtacaattaagtggcgtttgaataacaagagtgcaaaagtaaga
cagcaggctgctgaccttatctcccgaattgcagtggttatgaaacagtgtggagaggag
cagcttatgggtcacttgggtgtggttttatacgagtatctaggagaggagtatccagaa
gtgctgggttcaatcttgggagcactgaaagcaattgttaacgtcatcggtatgaccaag
atgactccaccaatcaaagatctgctacctaggttgactcctattttaaagaacaggcat
gagaaagtacaggagaactgcattgatcttgtgggacgtattgcagatcgtggagcagag
tttgtgcctgcaagagagtggatgaggatatgctttgagcttctggagatgctcaaggct
cacaagaaaggaattcgaagagccactgtcaacacctttgggtacatcgccaaagctatt
ggacctcaggatgtcttggctactcttcttaacaaccttaaggtgcaagaacgtcagaac
cgtgtttgtacaaccgtggctattgcaatcgttgctgagacttgctcacctttcaccgtt
ttgccagctcttatgaatgaataccgtgttcctgagcttaacgtgcagaatggtgtcctc
aaatctctgtctttcctctttgaatatattggtgaaatgggaaaggattatatctatgcc
gtgactcctctccttgaagatgctcttatggaccgggacctggttcatcgtcagactgca
gcttctgccgtgaaacatatggctcttggtgttgcaggtctaggctgtgaagatgctttg
gtgcaccttatgaattacgtgtggcccaatatcttcgagacttcacctcacgttatcaat
gctgttacagaagccattgagggaatgagagttgcattgggtgccgctgcaatactgaac
tactgtctgcagggtttgttccatccagcaaggaaagttagggaagtctactggaagata
tataattctctgtatattggagctcaggatgctcttgttgctgcttatcctactttggaa
aatgaaggagaaaatatctatagtagacccgagttgttgatgtttgtgtaa

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